RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 UBE4AQ14139 1066 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 BMP2KLQ5H9B9 411 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 METTL24Q5JXM2 366 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
CHGA-205ENST00000556098 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
CHGA-205ENST00000556098 INPP5BP32019 993 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 PRMT2P55345 433 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 UBXN2AP68543 259 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 TCP10Q12799 353 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 POLA2Q14181 598 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 HOOK2Q96ED9 719 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 UPF2Q9HAU5 1272 aaKnown RBP13.52□□□□□ -0.25
CHGA-205ENST00000556098 SRRDQ9UH36 339 aa13.52□□□□□ -0.25
CHGA-205ENST00000556098 DDX60LQ5H9U9 1706 aaKnown RBP13.51□□□□□ -0.25
CHGA-205ENST00000556098 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
CHGA-205ENST00000556098 GNRH1P01148 92 aa13.51□□□□□ -0.25
CHGA-205ENST00000556098 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
CHGA-205ENST00000556098 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
CHGA-205ENST00000556098 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
CHGA-205ENST00000556098 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
CHGA-205ENST00000556098 PRKCZQ05513 592 aa13.5□□□□□ -0.25
CHGA-205ENST00000556098 C17orf99Q6UX52 265 aa13.5□□□□□ -0.25
CHGA-205ENST00000556098 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
CHGA-205ENST00000556098 LRRCC1Q9C099 1032 aa13.5□□□□□ -0.25
CHGA-205ENST00000556098 UNC93B1Q9H1C4 597 aa13.5□□□□□ -0.25
CHGA-205ENST00000556098 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
CHGA-205ENST00000556098 MAST3O60307 1309 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 EVI5O60447 810 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 TFRCP02786 760 aaKnown RBP13.49□□□□□ -0.25
CHGA-205ENST00000556098 CYP2C8P10632 490 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 GJA8P48165 433 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 BCAMP50895 628 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 FCGRTP55899 365 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 PPATQ06203 517 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 ANKRD23Q86SG2 305 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 OSBPL3Q9H4L5 887 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 GABRQQ9UN88 632 aa13.49□□□□□ -0.25
CHGA-205ENST00000556098 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
CHGA-205ENST00000556098 GJB1P08034 283 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
CHGA-205ENST00000556098 ELNP15502 786 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 U2AF1L4Q8WU68 220 aaKnown RBP13.48□□□□□ -0.25
CHGA-205ENST00000556098 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 ZDHHC15Q96MV8 337 aa13.48□□□□□ -0.25
CHGA-205ENST00000556098 PARK7Q99497 189 aaKnown RBP13.48□□□□□ -0.25
CHGA-205ENST00000556098 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
CHGA-205ENST00000556098 FAM83AQ86UY5 434 aa13.47□□□□□ -0.25
CHGA-205ENST00000556098 BICC1Q9H694 974 aaKnown RBP13.47□□□□□ -0.25
CHGA-205ENST00000556098 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
CHGA-205ENST00000556098 SZT2Q5T011 3432 aa13.46□□□□□ -0.25
CHGA-205ENST00000556098 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
CHGA-205ENST00000556098 ADCY3O60266 1144 aa13.46□□□□□ -0.25
CHGA-205ENST00000556098 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
CHGA-205ENST00000556098 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.25
CHGA-205ENST00000556098 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.25
CHGA-205ENST00000556098 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
CHGA-205ENST00000556098 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
CHGA-205ENST00000556098 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
CHGA-205ENST00000556098 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
CHGA-205ENST00000556098 SOX1O00570 391 aaPredicted RBP13.45□□□□□ -0.26
CHGA-205ENST00000556098 TNPO2O14787 897 aaKnown RBP13.45□□□□□ -0.26
CHGA-205ENST00000556098 INHAP05111 366 aa13.45□□□□□ -0.26
CHGA-205ENST00000556098 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
CHGA-205ENST00000556098 DIXDC1Q155Q3 683 aa13.45□□□□□ -0.26
CHGA-205ENST00000556098 RABL6Q3YEC7 729 aaPredicted RBP13.45□□□□□ -0.26
CHGA-205ENST00000556098 PLEKHM2Q8IWE5 1019 aa13.45□□□□□ -0.26
CHGA-205ENST00000556098 FAM151AQ8WW52 585 aa13.45□□□□□ -0.26
CHGA-205ENST00000556098 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
CHGA-205ENST00000556098 FRMPD3Q5JV73 1810 aa13.45□□□□□ -0.26
CHGA-205ENST00000556098 CDK5RAP2Q96SN8 1893 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 ADGRA2Q96PE1 1338 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 PLXNB2O15031 1838 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 PDE8BO95263 885 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 SGPL1O95470 568 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 FLT3LGP49771 235 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 NFIAQ12857 509 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 TTC22Q5TAA0 569 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 SMCR8Q8TEV9 937 aaPredicted RBP13.44□□□□□ -0.26
CHGA-205ENST00000556098 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 USP40Q9NVE5 1235 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
CHGA-205ENST00000556098 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
CHGA-205ENST00000556098 SLC5A1P13866 664 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 CDC42EP5Q6NZY7 148 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 PAWRQ96IZ0 340 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms