RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SIL1Q9H173 461 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 ZNF70Q9UC06 446 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-216ENST00000556066 SERPINA10Q9UK55 444 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 CUL9Q8IWT3 2517 aa8.36□□□□□ -1.07
PSEN1-216ENST00000556066 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 CCER2I3L3R5 266 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 EYA2O00167 538 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 SLC5A1P13866 664 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 IREB2P48200 963 aaKnown RBP8.35□□□□□ -1.07
PSEN1-216ENST00000556066 TM4SF4P48230 202 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 PSEN2P49810 448 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
PSEN1-216ENST00000556066 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 CTU1Q7Z7A3 348 aaKnown RBP8.35□□□□□ -1.07
PSEN1-216ENST00000556066 TRMT2AQ8IZ69 625 aaKnown RBP8.35□□□□□ -1.07
PSEN1-216ENST00000556066 TBC1D22AQ8WUA7 517 aa8.35□□□□□ -1.07
PSEN1-216ENST00000556066 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-216ENST00000556066 MANSC4A6NHS7 340 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-216ENST00000556066 USP2O75604 605 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-216ENST00000556066 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-216ENST00000556066 RFX5P48382 616 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-216ENST00000556066 TNNI2P48788 182 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 CACNB3P54284 484 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 PTPN5P54829 565 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 LPIN2Q92539 896 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 TEKT1Q969V4 418 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 API5Q9BZZ5 524 aaKnown RBP8.34□□□□□ -1.07
PSEN1-216ENST00000556066 TMEM39BQ9GZU3 492 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
PSEN1-216ENST00000556066 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
PSEN1-216ENST00000556066 LAMB1P07942 1786 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 GPR25O00155 361 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 ZBTB48P10074 688 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-216ENST00000556066 FGFR2P21802 821 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-216ENST00000556066 RARSP54136 660 aaKnown RBP8.33□□□□□ -1.08
PSEN1-216ENST00000556066 INHBEP58166 350 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 ATG9AQ7Z3C6 839 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 ANKRD13AQ8IZ07 590 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 YTHDC1Q96MU7 727 aaKnown RBP8.33□□□□□ -1.08
PSEN1-216ENST00000556066 MEIS3Q99687 375 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 R3HDMLQ9H3Y0 253 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 TMOD2Q9NZR1 351 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 CEP126Q9P2H0 1117 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 PA2G4Q9UQ80 394 aaKnown RBP8.33□□□□□ -1.08
PSEN1-216ENST00000556066 HDAC5Q9UQL6 1122 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 MYH2Q9UKX2 1941 aa8.33□□□□□ -1.08
PSEN1-216ENST00000556066 MAST3O60307 1309 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 KIF16BQ96L93 1317 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 FKTNO75072 461 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 HDLBPQ00341 1268 aaKnown RBP8.32□□□□□ -1.08
PSEN1-216ENST00000556066 ATP2B3Q16720 1220 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 WDR66Q8TBY9 1149 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 FRAT1Q92837 279 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-216ENST00000556066 OPTNQ96CV9 577 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 TEPSINQ96N21 525 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 KCNK17Q96T54 332 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 GNL3LQ9NVN8 582 aaKnown RBP8.32□□□□□ -1.08
PSEN1-216ENST00000556066 TRIOBPQ9H2D6 2365 aa8.32□□□□□ -1.08
PSEN1-216ENST00000556066 UNCXA6NJT0 531 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 IGF2BP3O00425 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
PSEN1-216ENST00000556066 CIAO1O76071 339 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 GJA5P36382 358 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 IL15P40933 162 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-216ENST00000556066 PKN2Q16513 984 aaKnown RBP8.31□□□□□ -1.08
PSEN1-216ENST00000556066 OTUD7BQ6GQQ9 843 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 APOBEC3HQ6NTF7 200 aaKnown RBP8.31□□□□□ -1.08
PSEN1-216ENST00000556066 ZDHHC15Q96MV8 337 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 SUGT1Q9Y2Z0 365 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 CSADQ9Y600 493 aa8.31□□□□□ -1.08
PSEN1-216ENST00000556066 HTTP42858 3142 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 IPO8O15397 1037 aaKnown RBP8.3□□□□□ -1.08
PSEN1-216ENST00000556066 SRGAP3O43295 1099 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 EVI5O60447 810 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 LDHBP07195 334 aaKnown RBP8.3□□□□□ -1.08
PSEN1-216ENST00000556066 GNAI3P08754 354 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 PRDX5P30044 214 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 ADORA1P30542 326 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 PHKA1P46020 1223 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 TCP10Q12799 353 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 CRHR2Q13324 411 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 VGLL4Q14135 290 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 DIXDC1Q155Q3 683 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 NOM1Q5C9Z4 860 aaKnown RBP8.3□□□□□ -1.08
PSEN1-216ENST00000556066 INTS3Q68E01 1043 aaKnown RBP8.3□□□□□ -1.08
PSEN1-216ENST00000556066 HHIPL2Q6UWX4 724 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-216ENST00000556066 ARHGAP45Q92619 1136 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 MRIQ9BWK5 157 aa8.3□□□□□ -1.08
PSEN1-216ENST00000556066 KIAA0100Q14667 2235 aaKnown RBP8.3□□□□□ -1.08
PSEN1-216ENST00000556066 CCL15-CCL14A0A0B4J2E2 113 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 BCAR3O75815 825 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-216ENST00000556066 TRIM27P14373 513 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 TIMM10P62072 90 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms