RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 TRIM27P14373 513 aa21.9■■□□□ 1.1
NPC2-208ENST00000556009 EN2P19622 333 aaPredicted RBP21.9■■□□□ 1.1
NPC2-208ENST00000556009 ATF7IPQ6VMQ6 1270 aa21.9■■□□□ 1.1
NPC2-208ENST00000556009 SH3BP5LQ7L8J4 393 aa21.9■■□□□ 1.1
NPC2-208ENST00000556009 ADGRA2Q96PE1 1338 aa21.89■■□□□ 1.1
NPC2-208ENST00000556009 GPR75-ASB3A0A0A6YYF3 556 aa21.89■■□□□ 1.09
NPC2-208ENST00000556009 ERICH6Q7L0X2 663 aa21.89■■□□□ 1.09
NPC2-208ENST00000556009 SCYL3Q8IZE3 742 aa21.89■■□□□ 1.09
NPC2-208ENST00000556009 NPM3O75607 178 aaKnown RBP21.88■■□□□ 1.09
NPC2-208ENST00000556009 MAP4K4O95819 1239 aaPredicted RBP21.88■■□□□ 1.09
NPC2-208ENST00000556009 BTDP43251 543 aa21.88■■□□□ 1.09
NPC2-208ENST00000556009 HMG20BQ9P0W2 317 aa21.88■■□□□ 1.09
NPC2-208ENST00000556009 CPA4Q9UI42 421 aa21.88■■□□□ 1.09
NPC2-208ENST00000556009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.88■■□□□ 1.09
NPC2-208ENST00000556009 ATAD5Q96QE3 1844 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 MROH7-TTC4A0A0A0MT08 1334 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 DDTLA6NHG4 134 aaPredicted RBP21.87■■□□□ 1.09
NPC2-208ENST00000556009 BCAR3O75815 825 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 PTPRAP18433 802 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 MECOMQ03112 1051 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 GPAT2Q6NUI2 795 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 ZSCAN29Q8IWY8 852 aaPredicted RBP21.87■■□□□ 1.09
NPC2-208ENST00000556009 GCC1Q96CN9 775 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 NEUROD6Q96NK8 337 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 DDX4Q9NQI0 724 aaKnown RBP21.87■■□□□ 1.09
NPC2-208ENST00000556009 PCDH10Q9P2E7 1040 aa21.87■■□□□ 1.09
NPC2-208ENST00000556009 CTNND1O60716 968 aaKnown RBP21.86■■□□□ 1.09
NPC2-208ENST00000556009 LDHCP07864 332 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 HOXD10P28358 340 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 CTGFP29279 349 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 PSMC4P43686 418 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 RHBDL3P58872 404 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 G3BP1Q13283 466 aaKnown RBP eCLIP21.86■■□□□ 1.09
NPC2-208ENST00000556009 FASTKD5Q7L8L6 764 aaKnown RBP21.86■■□□□ 1.09
NPC2-208ENST00000556009 SPATA5Q8NB90 893 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 ZNF384Q8TF68 577 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 PICK1Q9NRD5 415 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 AFG3L2Q9Y4W6 797 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 ZHX2Q9Y6X8 837 aa21.86■■□□□ 1.09
NPC2-208ENST00000556009 A0A0G2JLL6 359 aaPredicted RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 PNMA6EA0A0J9YXQ4 647 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 TBC1D12O60347 775 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 ECM2O94769 699 aaPredicted RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 ARID4AP29374 1257 aaPredicted RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 GSTO1P78417 241 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 PRRT2Q7Z6L0 340 aaPredicted RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 TRIM47Q96LD4 638 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 PARK7Q99497 189 aaKnown RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 SRRDQ9UH36 339 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 TNNQ9UQP3 1299 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 CDK5RAP2Q96SN8 1893 aa21.85■■□□□ 1.09
NPC2-208ENST00000556009 MYO5AQ9Y4I1 1855 aaKnown RBP21.85■■□□□ 1.09
NPC2-208ENST00000556009 SLC4A8Q2Y0W8 1093 aa21.84■■□□□ 1.09
NPC2-208ENST00000556009 GORABQ5T7V8 394 aa21.84■■□□□ 1.09
NPC2-208ENST00000556009 SH3TC2Q8TF17 1288 aa21.84■■□□□ 1.09
NPC2-208ENST00000556009 NSUN4Q96CB9 384 aaKnown RBP21.84■■□□□ 1.09
NPC2-208ENST00000556009 SLC45A1Q9Y2W3 748 aa21.84■■□□□ 1.09
NPC2-208ENST00000556009 MYCP01106 439 aaPredicted RBP21.83■■□□□ 1.09
NPC2-208ENST00000556009 UQCRFS1P1P0C7P4 283 aa21.83■■□□□ 1.09
NPC2-208ENST00000556009 SLURP2P0DP57 97 aa21.83■■□□□ 1.09
NPC2-208ENST00000556009 BCRP11274 1271 aa21.83■■□□□ 1.09
NPC2-208ENST00000556009 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.09
NPC2-208ENST00000556009 GPR108Q9NPR9 543 aa21.83■■□□□ 1.09
NPC2-208ENST00000556009 FMNL1O95466 1100 aaPredicted RBP21.82■■□□□ 1.08
NPC2-208ENST00000556009 OSBPP22059 807 aa21.82■■□□□ 1.08
NPC2-208ENST00000556009 PICALMQ13492 652 aa21.82■■□□□ 1.08
NPC2-208ENST00000556009 ZKSCAN2Q63HK3 967 aa21.82■■□□□ 1.08
NPC2-208ENST00000556009 DOCK3Q8IZD9 2030 aa21.81■■□□□ 1.08
NPC2-208ENST00000556009 CYP2C8P10632 490 aa21.81■■□□□ 1.08
NPC2-208ENST00000556009 POLA2Q14181 598 aa21.81■■□□□ 1.08
NPC2-208ENST00000556009 PI16Q6UXB8 463 aa21.81■■□□□ 1.08
NPC2-208ENST00000556009 TBC1D9Q6ZT07 1266 aa21.81■■□□□ 1.08
NPC2-208ENST00000556009 SIPA1L1O43166 1804 aa21.8■■□□□ 1.08
NPC2-208ENST00000556009 MCAMP43121 646 aa21.8■■□□□ 1.08
NPC2-208ENST00000556009 TMEM57Q8N5G2 664 aa21.8■■□□□ 1.08
NPC2-208ENST00000556009 RAI14Q9P0K7 980 aa21.8■■□□□ 1.08
NPC2-208ENST00000556009 MAST2Q6P0Q8 1798 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 COL2A1P02458 1487 aaPredicted RBP21.79■■□□□ 1.08
NPC2-208ENST00000556009 FOCADQ5VW36 1801 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 FCGRTP55899 365 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 ATP8B2P98198 1209 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 RAET1EQ8TD07 263 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 SSH3Q8TE77 659 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 LOC285556D6RIA3 1793 aa21.79■■□□□ 1.08
NPC2-208ENST00000556009 IGSF3O75054 1194 aa21.78■■□□□ 1.08
NPC2-208ENST00000556009 GRK4P32298 578 aa21.78■■□□□ 1.08
NPC2-208ENST00000556009 GADL1Q6ZQY3 521 aa21.78■■□□□ 1.08
NPC2-208ENST00000556009 OSBPL5Q9H0X9 879 aaPredicted RBP21.78■■□□□ 1.08
NPC2-208ENST00000556009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.78■■□□□ 1.08
NPC2-208ENST00000556009 LRP2BPQ9P2M1 347 aa21.78■■□□□ 1.08
NPC2-208ENST00000556009 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.78■■□□□ 1.08
NPC2-208ENST00000556009 MYPNQ86TC9 1320 aa21.78■■□□□ 1.08
NPC2-208ENST00000556009 CEP290O15078 2479 aa21.77■■□□□ 1.08
NPC2-208ENST00000556009 TRIM75PA6NK02 468 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 MTFR1Q15390 333 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 TNNI3KQ59H18 835 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 ZNF512BQ96KM6 892 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms