RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 TRIM28Q13263 835 aaKnown RBP7.25□□□□□ -1.25
KTN1-223ENST00000555573 HP1BP3Q5SSJ5 553 aaPredicted RBP7.25□□□□□ -1.25
KTN1-223ENST00000555573 GK5Q6ZS86 529 aa7.25□□□□□ -1.25
KTN1-223ENST00000555573 ZSCAN1Q8NBB4 408 aa7.25□□□□□ -1.25
KTN1-223ENST00000555573 ARMC5Q96C12 935 aa7.25□□□□□ -1.25
KTN1-223ENST00000555573 PCDHGC5Q9Y5F6 944 aa7.25□□□□□ -1.25
KTN1-223ENST00000555573 MRVI1Q9Y6F6 885 aa7.25□□□□□ -1.25
KTN1-223ENST00000555573 CNTNAP5Q8WYK1 1306 aa7.25□□□□□ -1.25
KTN1-223ENST00000555573 SPDYE3A6NKU9 549 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 DCDC2CA8MYV0 355 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 ZNF165P49910 485 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 EXOSC6Q5RKV6 272 aaKnown RBP7.24□□□□□ -1.25
KTN1-223ENST00000555573 KIAA1211Q6ZU35 1233 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 ACAD11Q709F0 780 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 LOC105371045A0A1W2PR82 267 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 PIK3R2O00459 728 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 ELNP15502 786 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
KTN1-223ENST00000555573 REXO1Q8N1G1 1221 aaKnown RBP7.24□□□□□ -1.25
KTN1-223ENST00000555573 CPLX3Q8WVH0 158 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 ELMO3Q96BJ8 720 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 RUSC1Q9BVN2 902 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 SRRTQ9BXP5 876 aaKnown RBP7.24□□□□□ -1.25
KTN1-223ENST00000555573 TMPRSS13Q9BYE2 586 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 ZNF408Q9H9D4 720 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 RAD18Q9NS91 495 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 STRIP2Q9ULQ0 834 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 PCDHB14Q9Y5E9 798 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 CORINQ9Y5Q5 1042 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 CSADQ9Y600 493 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 SNCAIPQ9Y6H5 919 aa7.24□□□□□ -1.25
KTN1-223ENST00000555573 STK10O94804 968 aaKnown RBP7.23□□□□□ -1.25
KTN1-223ENST00000555573 HNRNPUQ00839 825 aaKnown RBP eCLIP7.23□□□□□ -1.25
KTN1-223ENST00000555573 IGF2-ASQ6U949 168 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 SHISA2Q6UWI4 295 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 HDXQ7Z353 690 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 C12orf40Q86WS4 652 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 SHDQ96IW2 340 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 FERD3LQ96RJ6 166 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 PPP1R9AQ9ULJ8 1098 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 ADAMTS8Q9UP79 889 aa7.23□□□□□ -1.25
KTN1-223ENST00000555573 SLFN14P0C7P3 912 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 ETFBP38117 255 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 RBL2Q08999 1139 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 GRIK4Q16099 956 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 PRRT3Q5FWE3 981 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 AKAP4Q5JQC9 854 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 FBXW10Q5XX13 1052 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 CYFIP1Q7L576 1253 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 PODNQ7Z5L7 613 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 MRPL18Q9H0U6 180 aaKnown RBP7.22□□□□□ -1.25
KTN1-223ENST00000555573 EHMT1Q9H9B1 1298 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 NOP53Q9NZM5 478 aaKnown RBP7.22□□□□□ -1.25
KTN1-223ENST00000555573 ZNRF3Q9ULT6 936 aa7.22□□□□□ -1.25
KTN1-223ENST00000555573 PRAMEF27A3QJZ7 478 aa7.21□□□□□ -1.25
KTN1-223ENST00000555573 ID3Q02535 119 aa7.21□□□□□ -1.25
KTN1-223ENST00000555573 NUTM2GQ5VZR2 741 aa7.21□□□□□ -1.25
KTN1-223ENST00000555573 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.21□□□□□ -1.25
KTN1-223ENST00000555573 BEND7Q8N7W2 519 aaPredicted RBP7.21□□□□□ -1.25
KTN1-223ENST00000555573 RNF208Q9H0X6 261 aa7.21□□□□□ -1.25
KTN1-223ENST00000555573 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.25
KTN1-223ENST00000555573 MEGF11A6BM72 1044 aa7.21□□□□□ -1.26
KTN1-223ENST00000555573 TMPRSS2O15393 492 aa7.21□□□□□ -1.26
KTN1-223ENST00000555573 ATE1O95260 518 aa7.21□□□□□ -1.26
KTN1-223ENST00000555573 HTR3BO95264 441 aa7.21□□□□□ -1.26
KTN1-223ENST00000555573 AGGF1Q8N302 714 aaeCLIP7.21□□□□□ -1.264e-8■■■□□ 14.9
KTN1-223ENST00000555573 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
KTN1-223ENST00000555573 HIF3AQ9Y2N7 669 aa7.21□□□□□ -1.26
KTN1-223ENST00000555573 PRR36Q9H6K5 1346 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 EIF6P56537 245 aaKnown RBP7.2□□□□□ -1.26
KTN1-223ENST00000555573 RING1Q06587 406 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 PPM1JQ5JR12 505 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 DPH6Q7L8W6 267 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 SMG8Q8ND04 991 aaKnown RBP7.2□□□□□ -1.26
KTN1-223ENST00000555573 HIRIP3Q9BW71 556 aaPredicted RBP7.2□□□□□ -1.26
KTN1-223ENST00000555573 LNPKQ9C0E8 428 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 ANTXR1Q9H6X2 564 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 AP4E1Q9UPM8 1137 aa7.2□□□□□ -1.26
KTN1-223ENST00000555573 ADH5P11766 374 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 DRD2P14416 443 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 COL8A1P27658 744 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 GRK4P32298 578 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 GIPRP48546 466 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 ERVK-24P63145 666 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 SUGCTQ9HAC7 445 aa7.19□□□□□ -1.26
KTN1-223ENST00000555573 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
KTN1-223ENST00000555573 ALX3O95076 343 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 SPATA31C1P0DKV0 1188 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 IMPDH2P12268 514 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 ANKS3Q6ZW76 656 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 FANCD2OSQ96PS1 177 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 CYP4F12Q9HCS2 524 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 DISC1Q9NRI5 854 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 REV1Q9UBZ9 1251 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 TACC3Q9Y6A5 838 aa7.18□□□□□ -1.26
KTN1-223ENST00000555573 TIAF1O95411 115 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms