RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-219ENST00000555323 OSBPL5Q9H0X9 879 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-219ENST00000555323 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
SYNE2-219ENST00000555323 SLC4A4Q9Y6R1 1079 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 ECM29Q5VYK3 1845 aa15.22■□□□□ 0.03
SYNE2-219ENST00000555323 FLT1P17948 1338 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 FOXP2O15409 715 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 SGSM2O43147 1006 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 USP5P45974 858 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 MAP3K10Q02779 954 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 TCP10Q12799 353 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 CCDC129Q6ZRS4 1044 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
SYNE2-219ENST00000555323 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 IL25Q9H293 177 aa15.21■□□□□ 0.03
SYNE2-219ENST00000555323 DHX36Q9H2U1 1008 aaKnown RBP15.21■□□□□ 0.03
SYNE2-219ENST00000555323 SCAF8Q9UPN6 1271 aaKnown RBP15.21■□□□□ 0.03
SYNE2-219ENST00000555323 ATRNL1Q5VV63 1379 aa15.21■□□□□ 0.02
SYNE2-219ENST00000555323 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
SYNE2-219ENST00000555323 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 PASKQ96RG2 1323 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 ADM5C9JUS6 153 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 PICALMQ13492 652 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 ALX1Q15699 326 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 SUPT20HL1Q3ZLR7 823 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 SH3BP5LQ7L8J4 393 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 IFNL3Q8IZI9 196 aa15.2■□□□□ 0.02
SYNE2-219ENST00000555323 POLR2AP24928 1970 aaKnown RBP15.2■□□□□ 0.02
SYNE2-219ENST00000555323 DDTLA6NHG4 134 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-219ENST00000555323 HSPD1P10809 573 aaKnown RBP15.19■□□□□ 0.02
SYNE2-219ENST00000555323 SBK1Q52WX2 424 aa15.19■□□□□ 0.02
SYNE2-219ENST00000555323 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
SYNE2-219ENST00000555323 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
SYNE2-219ENST00000555323 DLK2Q6UY11 383 aa15.19■□□□□ 0.02
SYNE2-219ENST00000555323 METTL16Q86W50 562 aaKnown RBP15.19■□□□□ 0.02
SYNE2-219ENST00000555323 ESYT1Q9BSJ8 1104 aa15.19■□□□□ 0.02
SYNE2-219ENST00000555323 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
SYNE2-219ENST00000555323 AK9Q5TCS8 1911 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 TRAF5O00463 557 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 TBC1D12O60347 775 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 NBPF12Q5TAG4 269 aaPredicted RBP15.18■□□□□ 0.02
SYNE2-219ENST00000555323 PRAMEF18Q5VWM3 479 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 TTC6Q86TZ1 520 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 FOXP4Q8IVH2 680 aaPredicted RBP15.18■□□□□ 0.02
SYNE2-219ENST00000555323 CDCA5Q96FF9 252 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 DSCC1Q9BVC3 393 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 EPB41L4AQ9HCS5 686 aaPredicted RBP15.18■□□□□ 0.02
SYNE2-219ENST00000555323 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 PI4KBQ9UBF8 816 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 PALD1Q9ULE6 856 aa15.18■□□□□ 0.02
SYNE2-219ENST00000555323 FGAP02671 866 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 C12orf60Q5U649 245 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 DDRGK1Q96HY6 314 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 NACAP1Q9BZK3 213 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
SYNE2-219ENST00000555323 USP17L12C9JPN9 530 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 USP17L21D6R901 530 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 APPP05067 770 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 PLCD1P51178 756 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 FMR1Q06787 632 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYNE2-219ENST00000555323 MAP3K11Q16584 847 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 CST9Q5W186 159 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 ZSCAN29Q8IWY8 852 aaPredicted RBP15.16■□□□□ 0.02
SYNE2-219ENST00000555323 CSRNP1Q96S65 589 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 EHD4Q9H223 541 aa15.16■□□□□ 0.02
SYNE2-219ENST00000555323 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
SYNE2-219ENST00000555323 POLR3DP05423 398 aaPredicted RBP15.15■□□□□ 0.02
SYNE2-219ENST00000555323 NF2P35240 595 aa15.15■□□□□ 0.02
SYNE2-219ENST00000555323 FKBP1BP68106 108 aa15.15■□□□□ 0.02
SYNE2-219ENST00000555323 GABPAQ06546 454 aa15.15■□□□□ 0.02
SYNE2-219ENST00000555323 MAP4K1Q92918 833 aa15.15■□□□□ 0.02
SYNE2-219ENST00000555323 NAPBQ9H115 298 aa15.15■□□□□ 0.02
SYNE2-219ENST00000555323 SAP30BPQ9UHR5 308 aaKnown RBP15.15■□□□□ 0.02
SYNE2-219ENST00000555323 HERC5Q9UII4 1024 aaKnown RBP15.15■□□□□ 0.02
SYNE2-219ENST00000555323 FOCADQ5VW36 1801 aa15.15■□□□□ 0.02
SYNE2-219ENST00000555323 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
SYNE2-219ENST00000555323 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
SYNE2-219ENST00000555323 USP2O75604 605 aaPredicted RBP15.14■□□□□ 0.01
SYNE2-219ENST00000555323 HLA-DOAP06340 250 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 PTH1RQ03431 593 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 DCAF15Q66K64 600 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 LSG1Q9H089 658 aaKnown RBP15.14■□□□□ 0.01
SYNE2-219ENST00000555323 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 ZNF112Q9UJU3 913 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 CDK5RAP2Q96SN8 1893 aa15.14■□□□□ 0.01
SYNE2-219ENST00000555323 SSC5DA1L4H1 1573 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
SYNE2-219ENST00000555323 TDO2P48775 406 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 KIAA1211Q6ZU35 1233 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms