RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 RSRC2Q7L4I2 434 aaKnown RBP10.13□□□□□ -0.79
SYNE2-217ENST00000555022 SMARCC1Q92922 1105 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-217ENST00000555022 EXOC4Q96A65 974 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 PLIN2Q99541 437 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 ATG3Q9NT62 314 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 TAB2Q9NYJ8 693 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
SYNE2-217ENST00000555022 SSBP05455 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
SYNE2-217ENST00000555022 ATP5JP18859 108 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 GUCY1A2P33402 732 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 PSME1Q06323 249 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 SLC4A8Q2Y0W8 1093 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 NUP88Q99567 741 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-217ENST00000555022 DEF6Q9H4E7 631 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 LMTK3Q96Q04 1460 aa10.13□□□□□ -0.79
SYNE2-217ENST00000555022 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CTAGE15A4D2H0 777 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 FGAP02671 866 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CTAGE8P0CG41 777 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 TDO2P48775 406 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 METAP2P50579 478 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 TRIM29Q14134 588 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 MUM1L1Q5H9M0 696 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 TTC39AQ5SRH9 613 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 KCTD16Q68DU8 428 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CTAGE6Q86UF2 777 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CTAGE4Q8IX94 777 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 PUS7LQ9H0K6 701 aaKnown RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 OVOS2A0A0J9YW53 1432 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 OVOS2Q6IE36 1432 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 NRKQ7Z2Y5 1582 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 A0A0G2JS52 829 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 AKR1B15C9JRZ8 316 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 ZNF185O15231 689 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 RNMTO43148 476 aaKnown RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 EIF3JO75822 258 aaKnown RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 TPM1P09493 284 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 EXOSC10Q01780 885 aaKnown RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 PPARAQ07869 468 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CTR9Q6PD62 1173 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 KDRP35968 1356 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 TSPOAP1O95153 1857 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CTAGE9A4FU28 777 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 RNF225M0QZC1 329 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 SNAP23O00161 211 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 ZEB2O60315 1214 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 CMA1P23946 247 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 FXR1P51114 621 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 PTPROQ16827 1216 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 SIRT1Q96EB6 747 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 LLPHQ9BRT6 129 aaKnown RBP10.12□□□□□ -0.79
SYNE2-217ENST00000555022 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
SYNE2-217ENST00000555022 AGLP35573 1532 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 BACH1O14867 736 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ERLIN1O75477 346 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ANTXR2P58335 489 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 IMMTQ16891 758 aaKnown RBP10.11□□□□□ -0.79
SYNE2-217ENST00000555022 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ZNF496Q96IT1 587 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-217ENST00000555022 CTNND2Q9UQB3 1225 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 A0A1W2PQ27 194 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 A0A1W2PQ64 194 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 A0A1W2PQD8 194 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 MACROD2A1Z1Q3 448 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 H0YHG0 523 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 PRDM1O75626 825 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ANKRD13DQ6ZTN6 518 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 MED15Q96RN5 788 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 HAUS7Q99871 368 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 CCDC151A5D8V7 595 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ZAP70P43403 619 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 RNASE9P60153 205 aaKnown RBP10.11□□□□□ -0.79
SYNE2-217ENST00000555022 SLC7A5Q01650 507 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 SLC39A14Q15043 492 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 POSTNQ15063 836 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 MAP9Q49MG5 647 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 HELBQ8NG08 1087 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-217ENST00000555022 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 EPSTI1Q96J88 318 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 PCMTD1Q96MG8 357 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ADGRG1Q9Y653 693 aa10.11□□□□□ -0.79
SYNE2-217ENST00000555022 ZNF213O14771 459 aa10.1□□□□□ -0.79
SYNE2-217ENST00000555022 MYBL2P10244 700 aa10.1□□□□□ -0.79
SYNE2-217ENST00000555022 C2orf54Q08AI8 447 aa10.1□□□□□ -0.79
SYNE2-217ENST00000555022 EZH2Q15910 746 aaKnown RBP10.1□□□□□ -0.79
SYNE2-217ENST00000555022 CYB5R4Q7L1T6 521 aa10.1□□□□□ -0.79
SYNE2-217ENST00000555022 KIRREL3Q8IZU9 778 aa10.1□□□□□ -0.79
SYNE2-217ENST00000555022 CHP1Q99653 195 aa10.1□□□□□ -0.79
SYNE2-217ENST00000555022 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms