RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 COPRSQ9NQ92 184 aa30.07■■■□□ 2.4
FOXA1-204ENST00000554607 LRRFIP2Q9Y608 721 aaKnown RBP30.07■■■□□ 2.4
FOXA1-204ENST00000554607 ATRNL1Q5VV63 1379 aa30.06■■■□□ 2.4
FOXA1-204ENST00000554607 A0A0G2JLL6 359 aaPredicted RBP30.06■■■□□ 2.4
FOXA1-204ENST00000554607 CT47B1P0C2W7 299 aaPredicted RBP30.06■■■□□ 2.4
FOXA1-204ENST00000554607 CYP2C8P10632 490 aa30.06■■■□□ 2.4
FOXA1-204ENST00000554607 PTPRAP18433 802 aa30.06■■■□□ 2.4
FOXA1-204ENST00000554607 PRRT2Q7Z6L0 340 aaPredicted RBP30.06■■■□□ 2.4
FOXA1-204ENST00000554607 API5Q9BZZ5 524 aaKnown RBP30.06■■■□□ 2.4
FOXA1-204ENST00000554607 SLC45A1Q9Y2W3 748 aa30.06■■■□□ 2.4
FOXA1-204ENST00000554607 CEP290O15078 2479 aa30.06■■■□□ 2.4
FOXA1-204ENST00000554607 PDS5AQ29RF7 1337 aaKnown RBP30.05■■■□□ 2.4
FOXA1-204ENST00000554607 CCL5P13501 91 aa30.05■■■□□ 2.4
FOXA1-204ENST00000554607 MAP3K10Q02779 954 aa30.05■■■□□ 2.4
FOXA1-204ENST00000554607 SPTY2D1Q68D10 685 aaPredicted RBP30.05■■■□□ 2.4
FOXA1-204ENST00000554607 SLAIN1Q8ND83 568 aa30.05■■■□□ 2.4
FOXA1-204ENST00000554607 FAM163AQ96GL9 167 aaPredicted RBP30.05■■■□□ 2.4
FOXA1-204ENST00000554607 RNF208Q9H0X6 261 aa30.05■■■□□ 2.4
FOXA1-204ENST00000554607 AFG3L2Q9Y4W6 797 aa30.05■■■□□ 2.4
FOXA1-204ENST00000554607 PRKCZQ05513 592 aa30.04■■■□□ 2.4
FOXA1-204ENST00000554607 HTATIP2Q9BUP3 242 aa30.04■■■□□ 2.4
FOXA1-204ENST00000554607 ABCF2Q9UG63 623 aa30.04■■■□□ 2.4
FOXA1-204ENST00000554607 NOB1Q9ULX3 412 aaKnown RBP30.04■■■□□ 2.4
FOXA1-204ENST00000554607 PA2G4Q9UQ80 394 aaKnown RBP30.04■■■□□ 2.4
FOXA1-204ENST00000554607 MYH2Q9UKX2 1941 aa30.04■■■□□ 2.4
FOXA1-204ENST00000554607 CTNND1O60716 968 aaKnown RBP30.03■■■□□ 2.4
FOXA1-204ENST00000554607 ADORA1P30542 326 aa30.03■■■□□ 2.4
FOXA1-204ENST00000554607 CDCA7LQ96GN5 454 aa30.03■■■□□ 2.4
FOXA1-204ENST00000554607 GADL1Q6ZQY3 521 aa30.02■■■□□ 2.4
FOXA1-204ENST00000554607 SH3BP5LQ7L8J4 393 aa30.02■■■□□ 2.4
FOXA1-204ENST00000554607 AKAP2Q9Y2D5 859 aa30.02■■■□□ 2.4
FOXA1-204ENST00000554607 DOCK2Q92608 1830 aa30.01■■■□□ 2.4
FOXA1-204ENST00000554607 TIMM10P62072 90 aa30.01■■■□□ 2.39
FOXA1-204ENST00000554607 RASGRF1Q13972 1273 aa30.01■■■□□ 2.39
FOXA1-204ENST00000554607 TRMT2AQ8IZ69 625 aaKnown RBP30.01■■■□□ 2.39
FOXA1-204ENST00000554607 RFX7Q2KHR2 1363 aa30.01■■■□□ 2.39
FOXA1-204ENST00000554607 CAPN2P17655 700 aa30■■■□□ 2.39
FOXA1-204ENST00000554607 DDTLA6NHG4 134 aaPredicted RBP29.99■■■□□ 2.39
FOXA1-204ENST00000554607 BTDP43251 543 aa29.99■■■□□ 2.39
FOXA1-204ENST00000554607 CHRDL2Q6WN34 429 aa29.99■■■□□ 2.39
FOXA1-204ENST00000554607 UBE2Q1Q7Z7E8 422 aa29.99■■■□□ 2.39
FOXA1-204ENST00000554607 GABRQQ9UN88 632 aa29.99■■■□□ 2.39
FOXA1-204ENST00000554607 MGAMO43451 1857 aa29.98■■■□□ 2.39
FOXA1-204ENST00000554607 ADCY3O60266 1144 aa29.98■■■□□ 2.39
FOXA1-204ENST00000554607 PICALMQ13492 652 aa29.98■■■□□ 2.39
FOXA1-204ENST00000554607 MVPQ14764 893 aaKnown RBP29.98■■■□□ 2.39
FOXA1-204ENST00000554607 ERICH6Q7L0X2 663 aa29.98■■■□□ 2.39
FOXA1-204ENST00000554607 SMCR8Q8TEV9 937 aaPredicted RBP29.98■■■□□ 2.39
FOXA1-204ENST00000554607 MROH7-TTC4A0A0A0MT08 1334 aa29.97■■■□□ 2.39
FOXA1-204ENST00000554607 PXYLP1Q8TE99 480 aa29.97■■■□□ 2.39
FOXA1-204ENST00000554607 U2AF1L4Q8WU68 220 aaKnown RBP29.97■■■□□ 2.39
FOXA1-204ENST00000554607 XAGE2Q96GT9 111 aa29.97■■■□□ 2.39
FOXA1-204ENST00000554607 DDX4Q9NQI0 724 aaKnown RBP29.97■■■□□ 2.39
FOXA1-204ENST00000554607 NR2E3Q9Y5X4 410 aa29.97■■■□□ 2.39
FOXA1-204ENST00000554607 TRIOBPQ9H2D6 2365 aa29.96■■■□□ 2.39
FOXA1-204ENST00000554607 GPR75-ASB3A0A0A6YYF3 556 aa29.96■■■□□ 2.39
FOXA1-204ENST00000554607 A0A1B0GUL7 405 aa29.96■■■□□ 2.39
FOXA1-204ENST00000554607 TNPO2O14787 897 aaKnown RBP29.96■■■□□ 2.39
FOXA1-204ENST00000554607 TBC1D12O60347 775 aa29.96■■■□□ 2.39
FOXA1-204ENST00000554607 NPM3O75607 178 aaKnown RBP29.96■■■□□ 2.39
FOXA1-204ENST00000554607 FLT3LGP49771 235 aa29.96■■■□□ 2.39
FOXA1-204ENST00000554607 MEIS3Q99687 375 aa29.96■■■□□ 2.39
FOXA1-204ENST00000554607 TRIM75PA6NK02 468 aa29.95■■■□□ 2.39
FOXA1-204ENST00000554607 SGPL1O95470 568 aa29.95■■■□□ 2.39
FOXA1-204ENST00000554607 MAP4K4O95819 1239 aaPredicted RBP29.95■■■□□ 2.39
FOXA1-204ENST00000554607 GNAI3P08754 354 aa29.95■■■□□ 2.39
FOXA1-204ENST00000554607 IRF5Q13568 498 aa29.95■■■□□ 2.39
FOXA1-204ENST00000554607 UNC93B1Q9H1C4 597 aa29.95■■■□□ 2.39
FOXA1-204ENST00000554607 AGTPBP1Q9UPW5 1226 aa29.95■■■□□ 2.39
FOXA1-204ENST00000554607 FARP2O94887 1054 aaPredicted RBP29.94■■■□□ 2.38
FOXA1-204ENST00000554607 LDHCP07864 332 aa29.94■■■□□ 2.38
FOXA1-204ENST00000554607 MECOMQ03112 1051 aa29.94■■■□□ 2.38
FOXA1-204ENST00000554607 PNMA3Q9UL41 463 aa29.94■■■□□ 2.38
FOXA1-204ENST00000554607 SRGAP3O43295 1099 aa29.93■■■□□ 2.38
FOXA1-204ENST00000554607 GSTO1P78417 241 aa29.93■■■□□ 2.38
FOXA1-204ENST00000554607 TFCP2Q12800 502 aa29.93■■■□□ 2.38
FOXA1-204ENST00000554607 DOCK1Q14185 1865 aa29.93■■■□□ 2.38
FOXA1-204ENST00000554607 RHBDL3P58872 404 aa29.92■■■□□ 2.38
FOXA1-204ENST00000554607 ARHGAP45Q92619 1136 aa29.92■■■□□ 2.38
FOXA1-204ENST00000554607 COA7Q96BR5 231 aa29.92■■■□□ 2.38
FOXA1-204ENST00000554607 NEUROD6Q96NK8 337 aa29.92■■■□□ 2.38
FOXA1-204ENST00000554607 OSBPL5Q9H0X9 879 aaPredicted RBP29.92■■■□□ 2.38
FOXA1-204ENST00000554607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.92■■■□□ 2.387e-7■□□□□ 11.2
FOXA1-204ENST00000554607 RBM27Q9P2N5 1060 aaKnown RBP29.92■■■□□ 2.38
FOXA1-204ENST00000554607 INHAP05111 366 aa29.91■■■□□ 2.38
FOXA1-204ENST00000554607 SLURP2P0DP57 97 aa29.91■■■□□ 2.38
FOXA1-204ENST00000554607 MTX1Q13505 466 aa29.91■■■□□ 2.38
FOXA1-204ENST00000554607 PROCA1Q8NCQ7 364 aaPredicted RBP29.91■■■□□ 2.38
FOXA1-204ENST00000554607 TBC1D2Q9BYX2 928 aa29.91■■■□□ 2.38
FOXA1-204ENST00000554607 PTPRFP10586 1907 aa29.9■■■□□ 2.38
FOXA1-204ENST00000554607 ELNP15502 786 aa29.9■■■□□ 2.38
FOXA1-204ENST00000554607 GORABQ5T7V8 394 aa29.9■■■□□ 2.38
FOXA1-204ENST00000554607 ANKRD13CQ8N6S4 541 aa29.9■■■□□ 2.38
FOXA1-204ENST00000554607 PHIPQ8WWQ0 1821 aa29.89■■■□□ 2.38
FOXA1-204ENST00000554607 TFRCP02786 760 aaKnown RBP29.89■■■□□ 2.38
FOXA1-204ENST00000554607 FAM110CQ1W6H9 321 aa29.89■■■□□ 2.38
FOXA1-204ENST00000554607 HMG20BQ9P0W2 317 aa29.89■■■□□ 2.38
FOXA1-204ENST00000554607 PABPC4Q13310 644 aaKnown RBP eCLIP29.88■■■□□ 2.37
FOXA1-204ENST00000554607 SPATA5Q8NB90 893 aa29.88■■■□□ 2.37
FOXA1-204ENST00000554607 RARSP54136 660 aaKnown RBP29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms