RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 GNAI2P04899 355 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ATP2B4P23634 1241 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 GIGYF2Q6Y7W6 1299 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 KRT26Q7Z3Y9 468 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DHX58Q96C10 678 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 EPB42P16452 691 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 USP47Q96K76 1375 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 FRMD3A2A2Y4 597 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DYMQ7RTS9 669 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 CFAP57Q96MR6 1250 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 LRFN2Q9ULH4 789 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 CNTLNQ9NXG0 1405 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 C6orf163Q5TEZ5 329 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 MICALCLQ6ZW33 695 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 UBN1Q9NPG3 1134 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 HMGB1P1B2RPK0 211 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 PSPC1Q8WXF1 523 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DHX57Q6P158 1386 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 NOP56O00567 594 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 KCNQ3O43525 872 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 MAPK9P45984 424 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ARHGAP44Q17R89 818 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 G2E3Q7L622 706 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DNAJC10Q8IXB1 793 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 CALML4Q96GE6 196 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 KAT14Q9H8E8 782 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DBNDD1Q9H9R9 158 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 PIDD1Q9HB75 910 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 USH1CQ9Y6N9 552 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 VPS18Q9P253 973 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 MX2P20592 715 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ST5P78524 1137 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 SLFNL1Q499Z3 407 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 AFF4Q9UHB7 1163 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 H0YC42 278 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 SSRP1Q08945 709 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC125Q86Z20 511 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 TRIM47Q96LD4 638 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 RP1P56715 2156 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 OTUD7AQ8TE49 926 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 PPP6R1Q9UPN7 881 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 FMNL1O95466 1100 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 SOX11P35716 441 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 MNAT1P51948 309 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 FAM186BQ8IYM0 893 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 RNPEPQ9H4A4 650 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 AMPD3Q01432 767 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DNAJC3Q13217 504 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 COPS6Q7L5N1 327 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 PSMB7Q99436 277 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 LMBR1LQ6UX01 489 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CERS3Q8IU89 383 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SMCR8Q8TEV9 937 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ABTB1Q969K4 478 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 C16orf45Q96MC5 204 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 MAK16Q9BXY0 300 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 TUT1Q9H6E5 874 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PPIP5K2O43314 1243 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 DDB1Q16531 1140 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SYCP2LQ5T4T6 812 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CNKSR1Q969H4 720 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PNMA3Q9UL41 463 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 TBX3O15119 743 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 MARK3P27448 753 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 IMMTQ16891 758 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 LRRC47Q8N1G4 583 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 FAM161BQ96MY7 647 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CPVLQ9H3G5 476 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PLCB1Q9NQ66 1216 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 DDX19BQ9UMR2 479 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 BUB1BO60566 1050 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 MFSD4BQ5TF39 518 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CXorf38Q8TB03 319 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 WDR66Q8TBY9 1149 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 MMTAG2Q9BU76 263 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 NPHP3Q7Z494 1330 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ANO6Q4KMQ2 910 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 C11orf96Q7Z7L8 435 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SDCCAG8Q86SQ7 713 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF280CQ8ND82 737 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 IPCEF1Q8WWN9 437 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 NUCKS1Q9H1E3 243 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 USP25Q9UHP3 1055 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 KLF18A0A0U1RQI7 1052 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CTAGE9A4FU28 777 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PWP1Q13610 501 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PLEKHM2Q8IWE5 1019 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 N4BP2L2Q92802 583 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 RIOK1Q9BRS2 568 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PPIEQ9UNP9 301 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ESRRBO95718 433 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PRR16Q569H4 304 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 FAM89AQ96GI7 184 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 KIF7Q2M1P5 1343 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 HLA-DOAP06340 250 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 GTF2IP78347 998 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 EML3Q32P44 896 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 IQCEQ6IPM2 695 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 LBHD1Q9BQE6 289 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PHAXQ9H814 394 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms