RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SOX10P56693 466 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 GSTO1P78417 241 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 MECOMQ03112 1051 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 PDE3AQ14432 1141 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 GPR75-ASB3A0A0A6YYF3 556 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 ENTPD3O75355 529 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 LDHCP07864 332 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 GJA5P36382 358 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 NFIAQ12857 509 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 DGKZQ13574 1117 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 TTC39AQ5SRH9 613 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZNF384Q8TF68 577 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 WRNIP1Q96S55 665 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 COL2A1P02458 1487 aaPredicted RBP12.77□□□□□ -0.37
PTCD2P1-201ENST00000554393 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 HMMRO75330 724 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 BTDP43251 543 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 TCP10Q12799 353 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 DBNLQ9UJU6 430 aaKnown RBP12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
PTCD2P1-201ENST00000554393 GPR25O00155 361 aa12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 WDHD1O75717 1129 aaPredicted RBP12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 RGS3P49796 1198 aa12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 CTU1Q7Z7A3 348 aaKnown RBP12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZNF296Q8WUU4 475 aaPredicted RBP12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 RAI14Q9P0K7 980 aa12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 LRP2BPQ9P2M1 347 aa12.75□□□□□ -0.37
PTCD2P1-201ENST00000554393 DLL1O00548 723 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 GTF2A2P52657 109 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 RHBDL3P58872 404 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 PPIL2Q13356 520 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 HABP4Q5JVS0 413 aaKnown RBP12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 NOL9Q5SY16 702 aaKnown RBP12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 PTPRFP10586 1907 aa12.74□□□□□ -0.37
PTCD2P1-201ENST00000554393 FKTNO75072 461 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 CYP2E1P05181 493 aaPredicted RBP12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 PPATQ06203 517 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 MIGA2Q7L4E1 593 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 RHPN1Q8TCX5 695 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZCCHC17Q9NP64 241 aaKnown RBP12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 ATAD5Q96QE3 1844 aa12.73□□□□□ -0.37
PTCD2P1-201ENST00000554393 CCL15-CCL14A0A0B4J2E2 113 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 RAB11FIP3O75154 756 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 CHRM1P11229 460 aaPredicted RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 CETPP11597 493 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 PLCG2P16885 1265 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 INPP5BP32019 993 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 SNAPC2Q13487 334 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 CCL15Q16663 113 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 NAA16Q6N069 864 aaPredicted RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 AACSQ86V21 672 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 BRI3BPQ8WY22 251 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 PTPN18Q99952 460 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
PTCD2P1-201ENST00000554393 SIPA1L1O43166 1804 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms