RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PICALMQ13492 652 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 SLC9C1Q4G0N8 1177 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 SCYL3Q8IZE3 742 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 PTCH2Q9Y6C5 1203 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 RFX7Q2KHR2 1363 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 MYH2Q9UKX2 1941 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 POTEFA5A3E0 1075 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 SLC34A2O95436 690 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 C17orf99Q6UX52 265 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 SH3BP5LQ7L8J4 393 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 TMEM106CQ9BVX2 250 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 DDX4Q9NQI0 724 aaKnown RBP23.1■■□□□ 1.29
CPSF2-203ENST00000554290 RAI14Q9P0K7 980 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 ATRNL1Q5VV63 1379 aa23.1■■□□□ 1.29
CPSF2-203ENST00000554290 PDE4DIPQ5VU43 2346 aa23.09■■□□□ 1.29
CPSF2-203ENST00000554290 DDTLA6NHG4 134 aaPredicted RBP23.09■■□□□ 1.29
CPSF2-203ENST00000554290 PRMT2P55345 433 aa23.09■■□□□ 1.29
CPSF2-203ENST00000554290 OS9Q13438 667 aaPredicted RBP23.09■■□□□ 1.29
CPSF2-203ENST00000554290 PI16Q6UXB8 463 aa23.09■■□□□ 1.29
CPSF2-203ENST00000554290 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
CPSF2-203ENST00000554290 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
CPSF2-203ENST00000554290 GPR108Q9NPR9 543 aa23.09■■□□□ 1.29
CPSF2-203ENST00000554290 ZHX2Q9Y6X8 837 aa23.09■■□□□ 1.29
CPSF2-203ENST00000554290 CTNND1O60716 968 aaKnown RBP23.08■■□□□ 1.29
CPSF2-203ENST00000554290 NPM3O75607 178 aaKnown RBP23.08■■□□□ 1.29
CPSF2-203ENST00000554290 PTPRAP18433 802 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 RHBDL3P58872 404 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 ATP8B2P98198 1209 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 MOGSQ13724 837 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 POLA2Q14181 598 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 FASTKD5Q7L8L6 764 aaKnown RBP23.08■■□□□ 1.29
CPSF2-203ENST00000554290 MIER1Q8N108 512 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 NSUN4Q96CB9 384 aaKnown RBP23.08■■□□□ 1.29
CPSF2-203ENST00000554290 ZNF333Q96JL9 665 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 ARHGAP39Q9C0H5 1083 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 CPA4Q9UI42 421 aa23.08■■□□□ 1.29
CPSF2-203ENST00000554290 CCDC158Q5M9N0 1113 aa23.07■■□□□ 1.28
CPSF2-203ENST00000554290 SSH3Q8TE77 659 aa23.07■■□□□ 1.28
CPSF2-203ENST00000554290 ZNF384Q8TF68 577 aa23.07■■□□□ 1.28
CPSF2-203ENST00000554290 PARK7Q99497 189 aaKnown RBP23.07■■□□□ 1.28
CPSF2-203ENST00000554290 NOL10Q9BSC4 688 aaKnown RBP23.07■■□□□ 1.28
CPSF2-203ENST00000554290 MCAMP43121 646 aa23.06■■□□□ 1.28
CPSF2-203ENST00000554290 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
CPSF2-203ENST00000554290 TBC1D12O60347 775 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 SURF6O75683 361 aaKnown RBP23.05■■□□□ 1.28
CPSF2-203ENST00000554290 HOXD10P28358 340 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 PSMC4P43686 418 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 TNNI3KQ59H18 835 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 TTC39AQ5SRH9 613 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 DIEXFQ68CQ4 756 aaKnown RBP23.05■■□□□ 1.28
CPSF2-203ENST00000554290 GPAT2Q6NUI2 795 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
CPSF2-203ENST00000554290 ITPRIPQ8IWB1 547 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 AFG3L2Q9Y4W6 797 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 FPGT-TNNI3KV9GXZ4 949 aa23.05■■□□□ 1.28
CPSF2-203ENST00000554290 HTTP42858 3142 aa23.04■■□□□ 1.28
CPSF2-203ENST00000554290 DOCK2Q92608 1830 aa23.04■■□□□ 1.28
CPSF2-203ENST00000554290 EN2P19622 333 aaPredicted RBP23.04■■□□□ 1.28
CPSF2-203ENST00000554290 SLC4A8Q2Y0W8 1093 aa23.04■■□□□ 1.28
CPSF2-203ENST00000554290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.04■■□□□ 1.28
CPSF2-203ENST00000554290 ADGRA2Q96PE1 1338 aa23.04■■□□□ 1.28
CPSF2-203ENST00000554290 FMNL1O95466 1100 aaPredicted RBP23.03■■□□□ 1.28
CPSF2-203ENST00000554290 GADL1Q6ZQY3 521 aa23.03■■□□□ 1.28
CPSF2-203ENST00000554290 ZBTB7BO15156 539 aaPredicted RBP23.02■■□□□ 1.28
CPSF2-203ENST00000554290 ECM2O94769 699 aaPredicted RBP23.02■■□□□ 1.28
CPSF2-203ENST00000554290 BAG3O95817 575 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 TEX11Q8IYF3 940 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 SH3TC2Q8TF17 1288 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 TRIM47Q96LD4 638 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 DBNDD2Q9BQY9 259 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 OSBPL5Q9H0X9 879 aaPredicted RBP23.02■■□□□ 1.28
CPSF2-203ENST00000554290 C1orf115Q9H7X2 142 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 SNRKQ9NRH2 765 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 SRRDQ9UH36 339 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 SLC45A1Q9Y2W3 748 aa23.02■■□□□ 1.28
CPSF2-203ENST00000554290 SLURP2P0DP57 97 aa23.01■■□□□ 1.27
CPSF2-203ENST00000554290 CYP2C8P10632 490 aa23.01■■□□□ 1.27
CPSF2-203ENST00000554290 PLCG2P16885 1265 aa23.01■■□□□ 1.27
CPSF2-203ENST00000554290 NAA16Q6N069 864 aaPredicted RBP23.01■■□□□ 1.27
CPSF2-203ENST00000554290 NOP58Q9Y2X3 529 aaKnown RBP23.01■■□□□ 1.27
CPSF2-203ENST00000554290 COL2A1P02458 1487 aaPredicted RBP23■■□□□ 1.27
CPSF2-203ENST00000554290 TRIM75PA6NK02 468 aa23■■□□□ 1.27
CPSF2-203ENST00000554290 IGSF3O75054 1194 aa23■■□□□ 1.27
CPSF2-203ENST00000554290 RLBP1P12271 317 aa23■■□□□ 1.27
CPSF2-203ENST00000554290 OSBPP22059 807 aa23■■□□□ 1.27
CPSF2-203ENST00000554290 ZNF512BQ96KM6 892 aaPredicted RBP23■■□□□ 1.27
CPSF2-203ENST00000554290 RBBP6Q7Z6E9 1792 aaKnown RBP22.99■■□□□ 1.27
CPSF2-203ENST00000554290 MYCP01106 439 aaPredicted RBP22.99■■□□□ 1.27
CPSF2-203ENST00000554290 BCRP11274 1271 aa22.99■■□□□ 1.27
CPSF2-203ENST00000554290 CTGFP29279 349 aa22.99■■□□□ 1.27
CPSF2-203ENST00000554290 FCGRTP55899 365 aa22.99■■□□□ 1.27
CPSF2-203ENST00000554290 RAET1EQ8TD07 263 aa22.99■■□□□ 1.27
CPSF2-203ENST00000554290 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
CPSF2-203ENST00000554290 FAM196BA6NMK8 535 aa22.98■■□□□ 1.27
CPSF2-203ENST00000554290 CYP2E1P05181 493 aaPredicted RBP22.98■■□□□ 1.27
CPSF2-203ENST00000554290 TBC1D2Q9BYX2 928 aa22.98■■□□□ 1.27
CPSF2-203ENST00000554290 DHX36Q9H2U1 1008 aaKnown RBP22.98■■□□□ 1.27
CPSF2-203ENST00000554290 HERC5Q9UII4 1024 aaKnown RBP22.98■■□□□ 1.27
CPSF2-203ENST00000554290 PPP4CP60510 307 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms