RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 STK32BQ9NY57 414 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 STK17AQ9UEE5 414 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 GNEQ9Y223 722 aaKnown RBP7.67□□□□□ -1.18
VPS33B-203ENST00000554264 AATKQ6ZMQ8 1374 aa7.67□□□□□ -1.18
VPS33B-203ENST00000554264 CASZ1Q86V15 1759 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 A6NHS1 94 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 ADARB2-AS1A8MUL3 147 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 H3BRB1 525 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 PPM1GO15355 546 aaPredicted RBP7.66□□□□□ -1.18
VPS33B-203ENST00000554264 FAM13AO94988 1023 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 PDGFAP04085 211 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 C1QTNF8P60827 252 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 SNRPNP63162 240 aaKnown RBP7.66□□□□□ -1.18
VPS33B-203ENST00000554264 ARHGAP4P98171 946 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 MAP3K10Q02779 954 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 DNM1Q05193 864 aaKnown RBP7.66□□□□□ -1.18
VPS33B-203ENST00000554264 TOM1L2Q6ZVM7 507 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 MTFR1LQ9H019 292 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 TUT1Q9H6E5 874 aaKnown RBP7.66□□□□□ -1.18
VPS33B-203ENST00000554264 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 PEAK1Q9H792 1746 aa7.66□□□□□ -1.18
VPS33B-203ENST00000554264 ELOA3CA0A087WX78 387 aaPredicted RBP7.65□□□□□ -1.18
VPS33B-203ENST00000554264 ELOA3DA6NLF2 546 aaPredicted RBP7.65□□□□□ -1.18
VPS33B-203ENST00000554264 MMP20O60882 483 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 DEKP35659 375 aaKnown RBP7.65□□□□□ -1.18
VPS33B-203ENST00000554264 IRX6P78412 446 aaPredicted RBP7.65□□□□□ -1.18
VPS33B-203ENST00000554264 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 TXNRD1Q16881 649 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 ELOA3BQ3SY89 546 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 ARHGEF28Q8N1W1 1705 aaKnown RBP7.65□□□□□ -1.18
VPS33B-203ENST00000554264 TOPAZ1Q8N9V7 1692 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 ELOA3Q8NG57 546 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 PNMA5Q96PV4 448 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 PDGFDQ9GZP0 370 aaPredicted RBP7.65□□□□□ -1.18
VPS33B-203ENST00000554264 IGFLR1Q9H665 355 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 POLIQ9UNA4 740 aa7.65□□□□□ -1.18
VPS33B-203ENST00000554264 MYOM1P52179 1685 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 LRRC37A3O60309 1634 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 PPIP5K1Q6PFW1 1433 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 WDR17Q8IZU2 1322 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 SOWAHDA6NJG2 315 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 MAP3K6O95382 1288 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 RARAP10276 462 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 MZF1P28698 734 aaPredicted RBP7.64□□□□□ -1.19
VPS33B-203ENST00000554264 RRP1P56182 461 aaKnown RBP7.64□□□□□ -1.19
VPS33B-203ENST00000554264 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 MARCH10Q8NA82 808 aaPredicted RBP7.64□□□□□ -1.19
VPS33B-203ENST00000554264 NEDD1Q8NHV4 660 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 CARD11Q9BXL7 1154 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 EFCC1Q9HA90 598 aa7.64□□□□□ -1.19
VPS33B-203ENST00000554264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.64□□□□□ -1.19
VPS33B-203ENST00000554264 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 CNTNAP5Q8WYK1 1306 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 ADH7P40394 386 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 CHSY3Q70JA7 882 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 DHX32Q7L7V1 743 aaKnown RBP7.63□□□□□ -1.19
VPS33B-203ENST00000554264 PTF1AQ7RTS3 328 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 GLYCTKQ8IVS8 523 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 NGEFQ8N5V2 710 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 ENAMQ9NRM1 1142 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 DNAJB12Q9NXW2 375 aaKnown RBP7.63□□□□□ -1.19
VPS33B-203ENST00000554264 FAM13BQ9NYF5 915 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 TMEM63CQ9P1W3 806 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 IVNS1ABPQ9Y6Y0 642 aa7.63□□□□□ -1.19
VPS33B-203ENST00000554264 SLIT3O75094 1523 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 SBF2Q86WG5 1849 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 EXOC5O00471 708 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
VPS33B-203ENST00000554264 TBC1D8BQ0IIM8 1120 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 ALKBH2Q6NS38 261 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 LINC00114Q6XXX2 140 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 UBE2OQ9C0C9 1292 aaKnown RBP7.62□□□□□ -1.19
VPS33B-203ENST00000554264 TLR7Q9NYK1 1049 aaKnown RBP7.62□□□□□ -1.19
VPS33B-203ENST00000554264 NAGPAQ9UK23 515 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 RCAN3Q9UKA8 241 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 SLC6A14Q9UN76 642 aa7.62□□□□□ -1.19
VPS33B-203ENST00000554264 USP6P35125 1406 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 KIAA1210Q9ULL0 1709 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 GSK3AP49840 483 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 MLLT1Q03111 559 aaPredicted RBP7.61□□□□□ -1.19
VPS33B-203ENST00000554264 KCNA1Q09470 495 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 AAMPQ13685 434 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 GPR162Q16538 588 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 COL13A1Q5TAT6 717 aaPredicted RBP7.61□□□□□ -1.19
VPS33B-203ENST00000554264 C20orf204Q6ZNR8 217 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 KCNH5Q8NCM2 988 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 TRPM4Q8TD43 1214 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 CARD10Q9BWT7 1032 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 ELP3Q9H9T3 547 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
VPS33B-203ENST00000554264 CPSF1Q10570 1443 aaKnown RBP7.61□□□□□ -1.19
VPS33B-203ENST00000554264 CENPJQ9HC77 1338 aaPredicted RBP7.6□□□□□ -1.19
VPS33B-203ENST00000554264 VIRMAQ69YN4 1812 aaKnown RBP7.6□□□□□ -1.19
VPS33B-203ENST00000554264 ALBP02768 609 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 CYP2E1P05181 493 aaPredicted RBP7.6□□□□□ -1.19
VPS33B-203ENST00000554264 AMPD1P23109 780 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 DGKGP49619 791 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms