RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 PICALMQ13492 652 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
LINC00520-203ENST00000554221 ATF7IPQ6VMQ6 1270 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 TBC1D9Q6ZT07 1266 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 SLF2Q8IX21 1173 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 ZGPATQ8N5A5 531 aaKnown RBP8.16□□□□□ -1.1
LINC00520-203ENST00000554221 TMEM106CQ9BVX2 250 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 SCUBE2Q9NQ36 999 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
LINC00520-203ENST00000554221 PNMA6EA0A0J9YXQ4 647 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 POTEFA5A3E0 1075 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 PDHXO00330 501 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 TLR2O60603 784 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 TRIM27P14373 513 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 EN2P19622 333 aaPredicted RBP8.15□□□□□ -1.1
LINC00520-203ENST00000554221 HNRNPUQ00839 825 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC00520-203ENST00000554221 CAP1Q01518 475 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 PPIL2Q13356 520 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 OS9Q13438 667 aaPredicted RBP8.15□□□□□ -1.1
LINC00520-203ENST00000554221 RASGRF1Q13972 1273 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 MVPQ14764 893 aaKnown RBP8.15□□□□□ -1.1
LINC00520-203ENST00000554221 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 ARHGAP39Q9C0H5 1083 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 PICK1Q9NRD5 415 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
LINC00520-203ENST00000554221 RAI14Q9P0K7 980 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 CPA4Q9UI42 421 aa8.15□□□□□ -1.1
LINC00520-203ENST00000554221 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.15□□□□□ -1.1
LINC00520-203ENST00000554221 SALL1Q9NSC2 1324 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 DDTLA6NHG4 134 aaPredicted RBP8.14□□□□□ -1.11
LINC00520-203ENST00000554221 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
LINC00520-203ENST00000554221 BTDP43251 543 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 MECOMQ03112 1051 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 SLC9C1Q4G0N8 1177 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 ZKSCAN2Q63HK3 967 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 GADL1Q6ZQY3 521 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 TMEM57Q8N5G2 664 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 SH3TC2Q8TF17 1288 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 HMG20BQ9P0W2 317 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 LRP2BPQ9P2M1 347 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 ZNF112Q9UJU3 913 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 PTCH2Q9Y6C5 1203 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 ZHX2Q9Y6X8 837 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 PSME4Q14997 1843 aa8.14□□□□□ -1.11
LINC00520-203ENST00000554221 POTEMA6NI47 508 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 ENTPD3O75355 529 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 SURF6O75683 361 aaKnown RBP8.13□□□□□ -1.11
LINC00520-203ENST00000554221 SEC24BO95487 1268 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 LDHCP07864 332 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 PSMC4P43686 418 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 GSTO1P78417 241 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 TTC39AQ5SRH9 613 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 PI16Q6UXB8 463 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 ANKRD23Q86SG2 305 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 FTSJ3Q8IY81 847 aaKnown RBP8.13□□□□□ -1.11
LINC00520-203ENST00000554221 SPATA5Q8NB90 893 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
LINC00520-203ENST00000554221 IDI2Q9BXS1 227 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00520-203ENST00000554221 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
LINC00520-203ENST00000554221 BIN2Q9UBW5 565 aaPredicted RBP8.13□□□□□ -1.11
LINC00520-203ENST00000554221 AKAP11Q9UKA4 1901 aa8.13□□□□□ -1.11
LINC00520-203ENST00000554221 GPR75-ASB3A0A0A6YYF3 556 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 PHF20L1A8MW92 1017 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 CXCL11O14625 94 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 UQCRFS1P1P0C7P4 283 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 CYP2C8P10632 490 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 PTPRAP18433 802 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 HOXD10P28358 340 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 TIE1P35590 1138 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 LACTBP83111 547 aaPredicted RBP8.12□□□□□ -1.11
LINC00520-203ENST00000554221 ATP8B2P98198 1209 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 MTX1Q13505 466 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 CCDC158Q5M9N0 1113 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
LINC00520-203ENST00000554221 DIEXFQ68CQ4 756 aaKnown RBP8.12□□□□□ -1.11
LINC00520-203ENST00000554221 C17orf99Q6UX52 265 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 ITPRIPQ8IWB1 547 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 SCYL3Q8IZE3 742 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 RAET1EQ8TD07 263 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 NSUN4Q96CB9 384 aaKnown RBP8.12□□□□□ -1.11
LINC00520-203ENST00000554221 FAM212AQ96EL1 285 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 NOL10Q9BSC4 688 aaKnown RBP8.12□□□□□ -1.11
LINC00520-203ENST00000554221 ZCCHC17Q9NP64 241 aaKnown RBP8.12□□□□□ -1.11
LINC00520-203ENST00000554221 TRPC6Q9Y210 931 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 PCDHB13Q9Y5F0 798 aa8.12□□□□□ -1.11
LINC00520-203ENST00000554221 CACNA1FO60840 1977 aa8.11□□□□□ -1.11
LINC00520-203ENST00000554221 MROH7-TTC4A0A0A0MT08 1334 aa8.11□□□□□ -1.11
LINC00520-203ENST00000554221 TRIM75PA6NK02 468 aa8.11□□□□□ -1.11
LINC00520-203ENST00000554221 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
LINC00520-203ENST00000554221 CTNND1O60716 968 aaKnown RBP8.11□□□□□ -1.11
LINC00520-203ENST00000554221 NOL9Q5SY16 702 aaKnown RBP8.11□□□□□ -1.11
LINC00520-203ENST00000554221 GPAT2Q6NUI2 795 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms