RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 DOCK2Q92608 1830 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 OPTNQ96CV9 577 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 NOL10Q9BSC4 688 aaKnown RBP17.34■□□□□ 0.37
PRKCH-207ENST00000553831 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 AATFQ9NY61 560 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRKCH-207ENST00000553831 SNCAIPQ9Y6H5 919 aa17.34■□□□□ 0.37
PRKCH-207ENST00000553831 DDTLA6NHG4 134 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 MANSC4A6NHS7 340 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 IGSF3O75054 1194 aa17.33■□□□□ 0.36
PRKCH-207ENST00000553831 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 TNS4Q8IZW8 715 aa17.33■□□□□ 0.36
PRKCH-207ENST00000553831 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 ZKSCAN4Q969J2 545 aaPredicted RBP17.33■□□□□ 0.36
PRKCH-207ENST00000553831 LAMB1P07942 1786 aa17.33■□□□□ 0.36
PRKCH-207ENST00000553831 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
PRKCH-207ENST00000553831 BAG3O95817 575 aa17.32■□□□□ 0.36
PRKCH-207ENST00000553831 CYP7A1P22680 504 aa17.32■□□□□ 0.36
PRKCH-207ENST00000553831 INPP5BP32019 993 aa17.32■□□□□ 0.36
PRKCH-207ENST00000553831 PPP4CP60510 307 aa17.32■□□□□ 0.36
PRKCH-207ENST00000553831 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
PRKCH-207ENST00000553831 DNAJC2Q99543 621 aaKnown RBP17.32■□□□□ 0.36
PRKCH-207ENST00000553831 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
PRKCH-207ENST00000553831 SPDYE5A6NIY4 337 aa17.31■□□□□ 0.36
PRKCH-207ENST00000553831 GOLIM4O00461 696 aa17.31■□□□□ 0.36
PRKCH-207ENST00000553831 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
PRKCH-207ENST00000553831 OTUD5Q96G74 571 aa17.31■□□□□ 0.36
PRKCH-207ENST00000553831 OSBPL5Q9H0X9 879 aaPredicted RBP17.31■□□□□ 0.36
PRKCH-207ENST00000553831 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
PRKCH-207ENST00000553831 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
PRKCH-207ENST00000553831 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
PRKCH-207ENST00000553831 PLCG2P16885 1265 aa17.3■□□□□ 0.36
PRKCH-207ENST00000553831 ATP5JP18859 108 aa17.3■□□□□ 0.36
PRKCH-207ENST00000553831 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
PRKCH-207ENST00000553831 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
PRKCH-207ENST00000553831 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
PRKCH-207ENST00000553831 EDC3Q96F86 508 aaKnown RBP17.3■□□□□ 0.36
PRKCH-207ENST00000553831 IGF2BP3O00425 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRKCH-207ENST00000553831 INHBEP58166 350 aa17.29■□□□□ 0.36
PRKCH-207ENST00000553831 ERO1BQ86YB8 467 aa17.29■□□□□ 0.36
PRKCH-207ENST00000553831 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
PRKCH-207ENST00000553831 CASP8AP2Q9UKL3 1982 aa17.29■□□□□ 0.36
PRKCH-207ENST00000553831 FLT1P17948 1338 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 TESPA1A2RU30 521 aaPredicted RBP17.28■□□□□ 0.36
PRKCH-207ENST00000553831 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 MAP3K10Q02779 954 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 PPIL2Q13356 520 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 NOL9Q5SY16 702 aaKnown RBP17.28■□□□□ 0.36
PRKCH-207ENST00000553831 MAPKAPK5Q8IW41 473 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 TGFBRAP1Q8WUH2 860 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 MS4A4AQ96JQ5 239 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 HAUS7Q99871 368 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 CDK5RAP2Q96SN8 1893 aa17.28■□□□□ 0.36
PRKCH-207ENST00000553831 FAM196BA6NMK8 535 aa17.27■□□□□ 0.36
PRKCH-207ENST00000553831 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
PRKCH-207ENST00000553831 PDE6AP16499 860 aa17.27■□□□□ 0.36
PRKCH-207ENST00000553831 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.36
PRKCH-207ENST00000553831 BRI3BPQ8WY22 251 aa17.27■□□□□ 0.36
PRKCH-207ENST00000553831 PTPN18Q99952 460 aa17.27■□□□□ 0.36
PRKCH-207ENST00000553831 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 CCL15-CCL14A0A0B4J2E2 113 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 IRF6O14896 467 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 GTF2A2P52657 109 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 PPATQ06203 517 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 CCL15Q16663 113 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 R3HDMLQ9H3Y0 253 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
PRKCH-207ENST00000553831 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
PRKCH-207ENST00000553831 TBC1D12O60347 775 aa17.25■□□□□ 0.35
PRKCH-207ENST00000553831 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
PRKCH-207ENST00000553831 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
PRKCH-207ENST00000553831 SCYL3Q8IZE3 742 aa17.25■□□□□ 0.35
PRKCH-207ENST00000553831 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
PRKCH-207ENST00000553831 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
PRKCH-207ENST00000553831 SIPA1L1O43166 1804 aa17.25■□□□□ 0.35
PRKCH-207ENST00000553831 TCRBV5S4A2TA0A5A2 114 aa17.24■□□□□ 0.35
PRKCH-207ENST00000553831 SNAPC2Q13487 334 aa17.24■□□□□ 0.35
PRKCH-207ENST00000553831 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
PRKCH-207ENST00000553831 AAMPQ13685 434 aa17.24■□□□□ 0.35
PRKCH-207ENST00000553831 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
PRKCH-207ENST00000553831 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
PRKCH-207ENST00000553831 ZNF296Q8WUU4 475 aaPredicted RBP17.24■□□□□ 0.35
PRKCH-207ENST00000553831 GPATCH3Q96I76 525 aa17.24■□□□□ 0.35
PRKCH-207ENST00000553831 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRKCH-207ENST00000553831 SAP30BPQ9UHR5 308 aaKnown RBP17.24■□□□□ 0.35
PRKCH-207ENST00000553831 DOCK1Q14185 1865 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 GPR25O00155 361 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 CTNND1O60716 968 aaKnown RBP17.23■□□□□ 0.35
PRKCH-207ENST00000553831 CETPP11597 493 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 USP5P45974 858 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 OTUD7AQ8TE49 926 aaPredicted RBP17.23■□□□□ 0.35
PRKCH-207ENST00000553831 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms