RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 CAPN2P17655 700 aa22.05■■□□□ 1.12
SYNE2-211ENST00000553801 IL15P40933 162 aaPredicted RBP22.05■■□□□ 1.12
SYNE2-211ENST00000553801 RGS3P49796 1198 aa22.05■■□□□ 1.12
SYNE2-211ENST00000553801 PRRT2Q7Z6L0 340 aaPredicted RBP22.05■■□□□ 1.12
SYNE2-211ENST00000553801 ZSCAN29Q8IWY8 852 aaPredicted RBP22.05■■□□□ 1.12
SYNE2-211ENST00000553801 ZFPM1Q8IX07 1006 aa22.05■■□□□ 1.12
SYNE2-211ENST00000553801 SLC45A1Q9Y2W3 748 aa22.05■■□□□ 1.12
SYNE2-211ENST00000553801 LRRFIP2Q9Y608 721 aaKnown RBP22.05■■□□□ 1.12
SYNE2-211ENST00000553801 PTPRAP18433 802 aa22.04■■□□□ 1.12
SYNE2-211ENST00000553801 PHKA1P46020 1223 aa22.04■■□□□ 1.12
SYNE2-211ENST00000553801 GADL1Q6ZQY3 521 aa22.04■■□□□ 1.12
SYNE2-211ENST00000553801 UBE2Q1Q7Z7E8 422 aa22.04■■□□□ 1.12
SYNE2-211ENST00000553801 MGAMO43451 1857 aa22.03■■□□□ 1.12
SYNE2-211ENST00000553801 U2AF1L4Q8WU68 220 aaKnown RBP22.03■■□□□ 1.12
SYNE2-211ENST00000553801 AFG3L2Q9Y4W6 797 aa22.03■■□□□ 1.12
SYNE2-211ENST00000553801 MYH2Q9UKX2 1941 aa22.03■■□□□ 1.12
SYNE2-211ENST00000553801 GAKO14976 1311 aa22.03■■□□□ 1.12
SYNE2-211ENST00000553801 ATRNL1Q5VV63 1379 aa22.02■■□□□ 1.12
SYNE2-211ENST00000553801 ZNF316A6NFI3 1004 aaPredicted RBP22.02■■□□□ 1.12
SYNE2-211ENST00000553801 ADCY3O60266 1144 aa22.02■■□□□ 1.12
SYNE2-211ENST00000553801 CTNND1O60716 968 aaKnown RBP22.02■■□□□ 1.12
SYNE2-211ENST00000553801 FARP2O94887 1054 aaPredicted RBP22.02■■□□□ 1.12
SYNE2-211ENST00000553801 MAP3K10Q02779 954 aa22.02■■□□□ 1.12
SYNE2-211ENST00000553801 SPTY2D1Q68D10 685 aaPredicted RBP22.02■■□□□ 1.12
SYNE2-211ENST00000553801 DZIP1Q86YF9 867 aaKnown RBP22.02■■□□□ 1.12
SYNE2-211ENST00000553801 SMC4Q9NTJ3 1288 aa22.02■■□□□ 1.12
SYNE2-211ENST00000553801 RBM27Q9P2N5 1060 aaKnown RBP22.02■■□□□ 1.12
SYNE2-211ENST00000553801 GABRQQ9UN88 632 aa22.02■■□□□ 1.12
SYNE2-211ENST00000553801 DOCK2Q92608 1830 aa22.01■■□□□ 1.11
SYNE2-211ENST00000553801 SGPL1O95470 568 aa22.01■■□□□ 1.11
SYNE2-211ENST00000553801 SLFN5Q08AF3 891 aa22.01■■□□□ 1.11
SYNE2-211ENST00000553801 CCDC102BQ68D86 513 aa22.01■■□□□ 1.11
SYNE2-211ENST00000553801 PXYLP1Q8TE99 480 aa22.01■■□□□ 1.11
SYNE2-211ENST00000553801 SMCR8Q8TEV9 937 aaPredicted RBP22.01■■□□□ 1.11
SYNE2-211ENST00000553801 FAM163AQ96GL9 167 aaPredicted RBP22.01■■□□□ 1.11
SYNE2-211ENST00000553801 UNC93B1Q9H1C4 597 aa22.01■■□□□ 1.11
SYNE2-211ENST00000553801 FLT3LGP49771 235 aa22■■□□□ 1.11
SYNE2-211ENST00000553801 ABCF2Q9UG63 623 aa22■■□□□ 1.11
SYNE2-211ENST00000553801 TNPO2O14787 897 aaKnown RBP21.99■■□□□ 1.11
SYNE2-211ENST00000553801 IRF5Q13568 498 aa21.99■■□□□ 1.11
SYNE2-211ENST00000553801 SH3BP5LQ7L8J4 393 aa21.99■■□□□ 1.11
SYNE2-211ENST00000553801 COPRSQ9NQ92 184 aa21.99■■□□□ 1.11
SYNE2-211ENST00000553801 PDS5AQ29RF7 1337 aaKnown RBP21.99■■□□□ 1.11
SYNE2-211ENST00000553801 DDTLA6NHG4 134 aaPredicted RBP21.98■■□□□ 1.11
SYNE2-211ENST00000553801 ADORA1P30542 326 aa21.98■■□□□ 1.11
SYNE2-211ENST00000553801 COA7Q96BR5 231 aa21.98■■□□□ 1.11
SYNE2-211ENST00000553801 PA2G4Q9UQ80 394 aaKnown RBP21.98■■□□□ 1.11
SYNE2-211ENST00000553801 TRIM75PA6NK02 468 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 ZBTB7BO15156 539 aaPredicted RBP21.97■■□□□ 1.11
SYNE2-211ENST00000553801 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
SYNE2-211ENST00000553801 INHAP05111 366 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 BTDP43251 543 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 PICALMQ13492 652 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 RASGRF1Q13972 1273 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 PNMA3Q9UL41 463 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 AGTPBP1Q9UPW5 1226 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 RFX7Q2KHR2 1363 aa21.97■■□□□ 1.11
SYNE2-211ENST00000553801 TBC1D12O60347 775 aa21.96■■□□□ 1.11
SYNE2-211ENST00000553801 ELNP15502 786 aa21.96■■□□□ 1.11
SYNE2-211ENST00000553801 ERICH6Q7L0X2 663 aa21.96■■□□□ 1.11
SYNE2-211ENST00000553801 API5Q9BZZ5 524 aaKnown RBP21.96■■□□□ 1.11
SYNE2-211ENST00000553801 DDX4Q9NQI0 724 aaKnown RBP21.96■■□□□ 1.11
SYNE2-211ENST00000553801 PTPRFP10586 1907 aa21.96■■□□□ 1.11
SYNE2-211ENST00000553801 DOCK1Q14185 1865 aa21.95■■□□□ 1.1
SYNE2-211ENST00000553801 EVI5O60447 810 aa21.95■■□□□ 1.1
SYNE2-211ENST00000553801 NPM3O75607 178 aaKnown RBP21.95■■□□□ 1.1
SYNE2-211ENST00000553801 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
SYNE2-211ENST00000553801 TIMM10P62072 90 aa21.95■■□□□ 1.1
SYNE2-211ENST00000553801 DEFB118Q96PH6 123 aa21.95■■□□□ 1.1
SYNE2-211ENST00000553801 PRO3102Q9H379 93 aa21.95■■□□□ 1.1
SYNE2-211ENST00000553801 MROH7-TTC4A0A0A0MT08 1334 aa21.95■■□□□ 1.1
SYNE2-211ENST00000553801 GPR75-ASB3A0A0A6YYF3 556 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 A0A1W2PPC1 479 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 MAP4K4O95819 1239 aaPredicted RBP21.94■■□□□ 1.1
SYNE2-211ENST00000553801 LDHCP07864 332 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 MVPQ14764 893 aaKnown RBP21.94■■□□□ 1.1
SYNE2-211ENST00000553801 FAM110CQ1W6H9 321 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 ANKRD13CQ8N6S4 541 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 PROCA1Q8NCQ7 364 aaPredicted RBP21.94■■□□□ 1.1
SYNE2-211ENST00000553801 TBC1D2Q9BYX2 928 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.94■■□□□ 1.1
SYNE2-211ENST00000553801 TAOK2Q9UL54 1235 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 NOB1Q9ULX3 412 aaKnown RBP21.94■■□□□ 1.1
SYNE2-211ENST00000553801 DOCK3Q8IZD9 2030 aa21.94■■□□□ 1.1
SYNE2-211ENST00000553801 GSTO1P78417 241 aa21.93■■□□□ 1.1
SYNE2-211ENST00000553801 PABPC4Q13310 644 aaKnown RBP eCLIP21.93■■□□□ 1.1
SYNE2-211ENST00000553801 XAGE2Q96GT9 111 aa21.93■■□□□ 1.1
SYNE2-211ENST00000553801 OSBPL5Q9H0X9 879 aaPredicted RBP21.93■■□□□ 1.1
SYNE2-211ENST00000553801 PAK6Q9NQU5 681 aaPredicted RBP21.93■■□□□ 1.1
SYNE2-211ENST00000553801 PHIPQ8WWQ0 1821 aa21.92■■□□□ 1.1
SYNE2-211ENST00000553801 A0A1B0GUL7 405 aa21.92■■□□□ 1.1
SYNE2-211ENST00000553801 GCLCP48506 637 aaPredicted RBP21.92■■□□□ 1.1
SYNE2-211ENST00000553801 MECOMQ03112 1051 aa21.92■■□□□ 1.1
SYNE2-211ENST00000553801 SLURP2P0DP57 97 aa21.91■■□□□ 1.1
SYNE2-211ENST00000553801 RHBDL3P58872 404 aa21.91■■□□□ 1.1
SYNE2-211ENST00000553801 TREML2Q5T2D2 321 aa21.91■■□□□ 1.1
SYNE2-211ENST00000553801 CRISPLD2Q9H0B8 497 aa21.91■■□□□ 1.1
SYNE2-211ENST00000553801 TFCP2Q12800 502 aa21.9■■□□□ 1.1
SYNE2-211ENST00000553801 SPP2Q13103 211 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms