RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
ATXN3-220ENST00000553491 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
ATXN3-220ENST00000553491 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
ATXN3-220ENST00000553491 NAIPQ13075 1403 aa6.82□□□□□ -1.32
ATXN3-220ENST00000553491 FAM135AQ9P2D6 1515 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 A2ML1A8K2U0 1454 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 ERVK-7P63135 1459 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 DYRK3O43781 588 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 ADAM11O75078 769 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 ALX3O95076 343 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 WISP1O95388 367 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-220ENST00000553491 EDN3P14138 238 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
ATXN3-220ENST00000553491 FBXO33Q7Z6M2 555 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 DZIP1LQ8IYY4 767 aaKnown RBP6.81□□□□□ -1.32
ATXN3-220ENST00000553491 TMC1Q8TDI8 760 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-220ENST00000553491 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 SETD5Q9C0A6 1442 aa6.81□□□□□ -1.32
ATXN3-220ENST00000553491 UNCXA6NJT0 531 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 H3BRJ5 948 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 GPR182O15218 404 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 TREHO43280 583 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 CDC25BP30305 580 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-220ENST00000553491 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
ATXN3-220ENST00000553491 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 SPATA31D1Q6ZQQ2 1576 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 EFCAB6Q5THR3 1501 aa6.8□□□□□ -1.32
ATXN3-220ENST00000553491 NLRP1Q9C000 1473 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 VWDEQ8N2E2 1590 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 A0A1W2PP55 124 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-220ENST00000553491 ORC1Q13415 861 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 DSC3Q14574 896 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 XP32Q5T750 250 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 DCAF11Q8TEB1 546 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 WNT8BQ93098 351 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
ATXN3-220ENST00000553491 SYNMO15061 1565 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 HFM1A2PYH4 1435 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-220ENST00000553491 DDX3YO15523 660 aaKnown RBP6.78□□□□□ -1.32
ATXN3-220ENST00000553491 P4HBP07237 508 aaKnown RBP6.78□□□□□ -1.32
ATXN3-220ENST00000553491 PIP4K2BP78356 416 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 FMR1Q06787 632 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-220ENST00000553491 PDE3BQ13370 1112 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 KIAA1211Q6ZU35 1233 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
ATXN3-220ENST00000553491 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 ALKBH8Q96BT7 664 aaKnown RBP6.78□□□□□ -1.32
ATXN3-220ENST00000553491 SLC26A8Q96RN1 970 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 TCF12Q99081 682 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 OSGEPQ9NPF4 335 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 SEC31BQ9NQW1 1179 aa6.78□□□□□ -1.32
ATXN3-220ENST00000553491 IQGAP1P46940 1657 aa6.77□□□□□ -1.32
ATXN3-220ENST00000553491 LMTK2Q8IWU2 1503 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 METTL12A8MUP2 240 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 LTKP29376 864 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
ATXN3-220ENST00000553491 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-220ENST00000553491 EAPPQ56P03 285 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-220ENST00000553491 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
ATXN3-220ENST00000553491 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-220ENST00000553491 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
ATXN3-220ENST00000553491 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
ATXN3-220ENST00000553491 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
ATXN3-220ENST00000553491 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
ATXN3-220ENST00000553491 NEFLP07196 543 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-220ENST00000553491 GRIA4P48058 902 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 CABP4P57796 275 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-220ENST00000553491 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 DNAJC25Q9H1X3 360 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 PTPRTO14522 1441 aa6.75□□□□□ -1.33
ATXN3-220ENST00000553491 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-220ENST00000553491 NOS1P29475 1434 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms