RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 MX1P20591 662 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 CHMLP26374 656 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 MAPK8P45983 427 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 PHKA2P46019 1235 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 NASPP49321 788 aaPredicted RBP7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 SCARF1Q14162 830 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 DSC3Q14574 896 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 HSP90AB4PQ58FF6 505 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 FAM26DQ5JW98 314 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 MRPL14Q6P1L8 145 aaKnown RBP7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 LYSMD3Q7Z3D4 306 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 AAASQ9NRG9 546 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 MIS18AQ9NYP9 233 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 PXDNLA1KZ92 1463 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 ARHGAP23Q9P227 1491 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 SLIT1O75093 1534 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 F6X3S4 739 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 GPR182O15218 404 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 PRPF40AO75400 957 aaKnown RBP7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 MICAL2O94851 1124 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 LDHBP07195 334 aaKnown RBP7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 HOXC9P31274 260 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 NEK4P51957 841 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 POU4F2Q12837 409 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 ZSCAN23Q3MJ62 389 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 IER5Q5VY09 327 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 PRICKLE2Q7Z3G6 844 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 RNF217Q8TC41 542 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 GPR152Q8TDT2 470 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 SSH3Q8TE77 659 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 TMX3Q96JJ7 454 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 SUSD3Q96L08 255 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 ZDHHC9Q9Y397 364 aa7.21□□□□□ -1.26
CHMP4A-210ENST00000552620 MAP3K5Q99683 1374 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 DIP2AQ14689 1571 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 A0A1B0GTH6 734 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 UBTFL1P0CB47 393 aaPredicted RBP7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 MCM5P33992 734 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 TERF1P54274 439 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 XPCQ01831 940 aaPredicted RBP7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 TAGLNQ01995 201 aaKnown RBP7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 CTC1Q2NKJ3 1217 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 ZNF787Q6DD87 383 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 ZSCAN30Q86W11 494 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 CRIPAKQ8N1N5 446 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 IL17REQ8NFR9 667 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 SYAP1Q96A49 352 aaPredicted RBP7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 NAP1L5Q96NT1 182 aaPredicted RBP7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 SLC26A8Q96RN1 970 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 USP44Q9H0E7 712 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 TIMMDC1Q9NPL8 285 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 EXOC6BQ9Y2D4 811 aa7.2□□□□□ -1.26
CHMP4A-210ENST00000552620 PNMA6EA0A0J9YXQ4 647 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 TTLL8A6PVC2 850 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 AXIN1O15169 862 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 IGHA2P01877 340 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 TPM2P07951 284 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 HSPA4P34932 840 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 ARSJQ5FYB0 599 aaPredicted RBP7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 CAVIN1Q6NZI2 390 aaKnown RBP7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 LRSAM1Q6UWE0 723 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 ZGPATQ8N5A5 531 aaKnown RBP7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 IP6K1Q92551 441 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 RILPL2Q969X0 211 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 KIF1BPQ96EK5 621 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 BCS1LQ9Y276 419 aa7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 LRRFIP2Q9Y608 721 aaKnown RBP7.19□□□□□ -1.26
CHMP4A-210ENST00000552620 FMN2Q9NZ56 1722 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 CEP170BQ9Y4F5 1589 aaPredicted RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 SURF6O75683 361 aaKnown RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 TCF3P15923 654 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 MSNP26038 577 aaKnown RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 SMCPP49901 116 aaPredicted RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 IDH3AP50213 366 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 ARSDP51689 593 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 ALG1LQ6GMV1 187 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 GPT2Q8TD30 523 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 PDLIM2Q96JY6 352 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 IGSF5Q9NSI5 407 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 FNDC3AQ9Y2H6 1198 aaKnown RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 GJA3Q9Y6H8 435 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 LRRC37A3O60309 1634 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 WDR33Q9C0J8 1336 aaKnown RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 USP42Q9H9J4 1324 aaKnown RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 RIMS1Q86UR5 1692 aaKnown RBP7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 ADGRL3Q9HAR2 1447 aa7.18□□□□□ -1.26
CHMP4A-210ENST00000552620 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 PNMA6FA0A0J9YX94 578 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 OFD1O75665 1012 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 ALDH1L1O75891 902 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 LETM1O95202 739 aaPredicted RBP7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 EPB42P16452 691 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 ATP4AP20648 1035 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms