RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CHMP2AO43633 222 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 SNAP25P60880 206 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 NECTIN1Q15223 517 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 ZNF804AQ7Z570 1209 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 PPARAQ07869 468 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 N4BP3O15049 544 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 CENPHQ9H3R5 247 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 TNKSO95271 1327 aa12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 BAZ2BQ9UIF8 2168 aaKnown RBP12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 MAP2P11137 1827 aaKnown RBP12.34□□□□□ -0.43
TGFBR1-209ENST00000552516 STAT6P42226 847 aa12.33□□□□□ -0.43
TGFBR1-209ENST00000552516 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.43
TGFBR1-209ENST00000552516 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.43
TGFBR1-209ENST00000552516 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.43
TGFBR1-209ENST00000552516 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.43
TGFBR1-209ENST00000552516 MRVI1Q9Y6F6 885 aa12.33□□□□□ -0.43
TGFBR1-209ENST00000552516 TXKP42681 527 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 NDUFA8P51970 172 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 PTF1AQ7RTS3 328 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 VPS16Q9H269 839 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 SENP2Q9HC62 589 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 ZNF202O95125 648 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 TNNT3P45378 269 aaPredicted RBP12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 MTIF2P46199 727 aaKnown RBP12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 TERF1P54274 439 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 H7C1W4 665 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 MYO1BO43795 1136 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 CT47A1Q5JQC4 288 aaPredicted RBP12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 FOXO4P98177 505 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 PTPROQ16827 1216 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 TRIM47Q96LD4 638 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 POLR1AO95602 1720 aaPredicted RBP12.33□□□□□ -0.44
TGFBR1-209ENST00000552516 SMTNL1A8MU46 457 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 KIF5BP33176 963 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 LDHCP07864 332 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 USP8P40818 1118 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 STIM1Q13586 685 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 TDRD12Q587J7 1177 aaKnown RBP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 ZKSCAN5Q9Y2L8 839 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 ASIC1P78348 528 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 NYXQ9GZU5 481 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 KIAA1328Q86T90 577 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 TBC1D10CQ8IV04 446 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 SLC16A2P36021 539 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
TGFBR1-209ENST00000552516 GNG11P61952 73 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 UBXN2AP68543 259 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 CLEC10AQ8IUN9 316 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
TGFBR1-209ENST00000552516 KRT2P35908 639 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 IQGAP1P46940 1657 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 KLRK1P26718 216 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 CYB5R4Q7L1T6 521 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 ANKARQ7Z5J8 1434 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 ZC3H13Q5T200 1668 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms