RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
CDK4-211ENST00000552254 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
CDK4-211ENST00000552254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDK4-211ENST00000552254 PRDM6Q9NQX0 595 aa11.17□□□□□ -0.62
CDK4-211ENST00000552254 DAGLAQ9Y4D2 1042 aa11.17□□□□□ -0.62
CDK4-211ENST00000552254 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
CDK4-211ENST00000552254 USP2O75604 605 aaPredicted RBP11.16□□□□□ -0.62
CDK4-211ENST00000552254 ATP5JP18859 108 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 ANKRD45Q5TZF3 282 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 DZIP1Q86YF9 867 aaKnown RBP11.16□□□□□ -0.62
CDK4-211ENST00000552254 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
CDK4-211ENST00000552254 SLC10A4Q96EP9 437 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 TMEM39BQ9GZU3 492 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 R3HDMLQ9H3Y0 253 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
CDK4-211ENST00000552254 RAI14Q9P0K7 980 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 LRP2BPQ9P2M1 347 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 PTPN22Q9Y2R2 807 aa11.16□□□□□ -0.62
CDK4-211ENST00000552254 GAKO14976 1311 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 MUC3AQ02505 3323 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 H0YGN5 161 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 PPP1R12BO60237 982 aaPredicted RBP11.15□□□□□ -0.62
CDK4-211ENST00000552254 SUPT20HL1Q3ZLR7 823 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 CD99L2Q8TCZ2 262 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
CDK4-211ENST00000552254 TEPSINQ96N21 525 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 ANTXR1Q9H6X2 564 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 EFCC1Q9HA90 598 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 PPP2R3BQ9Y5P8 575 aa11.15□□□□□ -0.62
CDK4-211ENST00000552254 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
CDK4-211ENST00000552254 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
CDK4-211ENST00000552254 LDHCP07864 332 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 GJA5P36382 358 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 GSTO1P78417 241 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 MAP3K11Q16584 847 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 SLC9C1Q4G0N8 1177 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 NBPF11Q86T75 865 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
CDK4-211ENST00000552254 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 WNK4Q96J92 1243 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 BOLA2Q9H3K6 86 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 ECHDC1Q9NTX5 307 aa11.14□□□□□ -0.63
CDK4-211ENST00000552254 LAMB1P07942 1786 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 MROH7-TTC4A0A0A0MT08 1334 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 HTTP42858 3142 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 GPR75-ASB3A0A0A6YYF3 556 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 GOLIM4O00461 696 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 IGSF3O75054 1194 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 CENPBP07199 599 aaPredicted RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 IREB2P48200 963 aaKnown RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 TNFAIP1Q13829 316 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 CDC42EP5Q6NZY7 148 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 DPF3Q92784 378 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 ARMC5Q96C12 935 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 HAUS7Q99871 368 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
CDK4-211ENST00000552254 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
CDK4-211ENST00000552254 SALL3Q9BXA9 1300 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 IGF2BP3O00425 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDK4-211ENST00000552254 IDH1O75874 414 aaKnown RBP11.12□□□□□ -0.63
CDK4-211ENST00000552254 PLA2G5P39877 138 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 BTDP43251 543 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 TNNI2P48788 182 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 INHBEP58166 350 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 ARHGEF6Q15052 776 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 TSHZ3Q63HK5 1081 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
CDK4-211ENST00000552254 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 ANKRD13AQ8IZ07 590 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 GPATCH3Q96I76 525 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 TMOD2Q9NZR1 351 aa11.12□□□□□ -0.63
CDK4-211ENST00000552254 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 MYH1P12882 1939 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 MX1P20591 662 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 NUCB1Q02818 461 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 MAP3K12Q12852 859 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 ADGRA1Q86SQ6 560 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 CHD1LQ86WJ1 897 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 LNPKQ9C0E8 428 aa11.11□□□□□ -0.63
CDK4-211ENST00000552254 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
CDK4-211ENST00000552254 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
CDK4-211ENST00000552254 COL9A1P20849 921 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms