RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SMG9Q9H0W8 520 aaKnown RBP5.78□□□□□ -1.48
LSM6P2-201ENST00000552208 METTL14Q9HCE5 456 aaKnown RBP5.78□□□□□ -1.48
LSM6P2-201ENST00000552208 ZMYM5Q9UJ78 669 aa5.78□□□□□ -1.48
LSM6P2-201ENST00000552208 B2RBV5 119 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 GPR25O00155 361 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 HTR3BO95264 441 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 EPHA1P21709 976 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 GUCY2CP25092 1073 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 ADH7P40394 386 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 MASP1P48740 699 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 GRIK5Q16478 980 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 PPP2R5EQ16537 467 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 MTERF2Q49AM1 385 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 HGSNATQ68CP4 663 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 C6orf15Q6UXA7 325 aaPredicted RBP5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 FAM178BQ8IXR5 827 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 CACTIN-AS1Q8N1I8 211 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 TMEM40Q8WWA1 233 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 NANOS1Q8WY41 292 aaKnown RBP5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 LACRTQ9GZZ8 138 aa5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
LSM6P2-201ENST00000552208 H3BRJ5 948 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 DDAH1O94760 285 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 ACRP10323 421 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 CDC27P30260 824 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 MAP1SQ66K74 1059 aaPredicted RBP5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 INTS3Q68E01 1043 aaKnown RBP5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 ELMSAN1Q6PJG2 1045 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 MICALL1Q8N3F8 863 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 DDX54Q8TDD1 881 aaKnown RBP5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 GPBAR1Q8TDU6 330 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 STAG1Q8WVM7 1258 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 TRERF1Q96PN7 1200 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 KRT82Q9NSB4 513 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 SNCAIPQ9Y6H5 919 aa5.76□□□□□ -1.49
LSM6P2-201ENST00000552208 KDM2BQ8NHM5 1336 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 LTBP3Q9NS15 1303 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 TM4SF5O14894 197 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 DNAJA2O60884 412 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 ARAFP10398 606 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 BMP4P12644 408 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 BAG6P46379 1132 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 TBC1D8BQ0IIM8 1120 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 INPP5AQ14642 412 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 DALRD3Q5D0E6 543 aaKnown RBP5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 FOXR1Q6PIV2 292 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 FCHSD1Q86WN1 690 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 NPAS3Q8IXF0 933 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 SYNPOQ8N3V7 929 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 ATG4CQ96DT6 458 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 CHMP4AQ9BY43 222 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 KLHL42Q9P2K6 505 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 PFDN2Q9UHV9 154 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 CORINQ9Y5Q5 1042 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 PTCH2Q9Y6C5 1203 aa5.75□□□□□ -1.49
LSM6P2-201ENST00000552208 SLC22A31A6NKX4 558 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 PPFIA3O75145 1194 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 ECEL1O95672 775 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 NME1P15531 152 aaKnown RBP5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 TCEA2Q15560 299 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 ZYXQ15942 572 aaKnown RBP5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 LONRF2Q1L5Z9 754 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 WIPI1Q5MNZ9 446 aaPredicted RBP5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 XP32Q5T750 250 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 CDCP2Q5VXM1 449 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 PSAPL1Q6NUJ1 521 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 LRFN4Q6PJG9 635 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 UNC5AQ6ZN44 842 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 CYFIP1Q7L576 1253 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 VWA5B2Q8N398 1253 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 WNT8BQ93098 351 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 PLPPR2Q96GM1 343 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 CCDC86Q9H6F5 360 aaKnown RBP5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 CNNM2Q9H8M5 875 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 DDX56Q9NY93 547 aaKnown RBP5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 GMIPQ9P107 970 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 REV1Q9UBZ9 1251 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 PCDHA4Q9UN74 947 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 STARD13Q9Y3M8 1113 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 SLC12A7Q9Y666 1083 aa5.74□□□□□ -1.49
LSM6P2-201ENST00000552208 TNFRSF10CO14798 259 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 ADCY3O60266 1144 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 ZNF862O60290 1169 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 ADH6P28332 368 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 CABP4P57796 275 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 PIP4K2BP78356 416 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 GSTM4Q03013 218 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 SSRP1Q08945 709 aaKnown RBP5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 GAS6Q14393 721 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 NCAPHQ15003 741 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 PLEKHG6Q3KR16 790 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 OVOS1Q6IE37 1185 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 C20orf204Q6ZNR8 217 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 KRT26Q7Z3Y9 468 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 IRF2BPLQ9H1B7 796 aa5.73□□□□□ -1.49
LSM6P2-201ENST00000552208 ELOA3CA0A087WX78 387 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms