RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ABCA6Q8N139 1617 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 SSH2Q76I76 1423 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 IFT140Q96RY7 1462 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 ZBTB7CA1YPR0 619 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 TTC36A6NLP5 189 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 FOXO3O43524 673 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 PPP1R12BO60237 982 aaPredicted RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 THBS1P07996 1170 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 ZSCAN22P10073 491 aaPredicted RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 ATP2B4P23634 1241 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 CHMLP26374 656 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 TXLNAP40222 546 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 TDO2P48775 406 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 EXOSC9Q06265 439 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 SMC1AQ14683 1233 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 SART3Q15020 963 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 IQCB1Q15051 598 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 CC2D1AQ6P1N0 951 aaPredicted RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 TMCO3Q6UWJ1 677 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 RSRC2Q7L4I2 434 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 ITPRIPQ8IWB1 547 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 EFCAB13Q8IY85 973 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 SPC24Q8NBT2 197 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 C7orf43Q8WVR3 580 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 RTF1Q92541 710 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 FAXDC2Q96IV6 333 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 PLEKHF1Q96S99 279 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 SRRTQ9BXP5 876 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 CBX8Q9HC52 389 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 IFT57Q9NWB7 429 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 ADAM21Q9UKJ8 722 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 DYRK1BQ9Y463 629 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 PARP3Q9Y6F1 533 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 CEP152O94986 1710 aa6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 TDRD9Q8NDG6 1382 aaKnown RBP6.18□□□□□ -1.42
LSM3P2-201ENST00000551246 FAM135BQ49AJ0 1406 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 AK9Q5TCS8 1911 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 CDC42BPAQ5VT25 1732 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 KIAA1210Q9ULL0 1709 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 A0A1B0GTH6 734 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 SERTM1A2A2V5 107 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 H3BQF6 201 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 ERC2O15083 957 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 RTN2O75298 545 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 SDSP20132 328 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 MAP2K2P36507 400 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 TYRO3Q06418 890 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 DDR1Q08345 913 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 GRIK3Q13003 919 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 ARHGAP29Q52LW3 1261 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 FAM43BQ6ZT52 329 aaPredicted RBP6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 C1orf216Q8TAB5 229 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 HNRNPLLQ8WVV9 542 aaKnown RBP6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 ITFG2Q969R8 447 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 KLRG1Q96E93 195 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 ZCCHC17Q9NP64 241 aaKnown RBP6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 TIMMDC1Q9NPL8 285 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 TOMM22Q9NS69 142 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 CUEDC1Q9NWM3 386 aaPredicted RBP6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 ZDHHC3Q9NYG2 299 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 CNPY2Q9Y2B0 182 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 PHLPP2Q6ZVD8 1323 aa6.17□□□□□ -1.42
LSM3P2-201ENST00000551246 COL3A1P02461 1466 aaPredicted RBP6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 MAST1Q9Y2H9 1570 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 EFCAB8A8MWE9 144 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 PATL2C9JE40 543 aaKnown RBP6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 GOLIM4O00461 696 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 PPFIA3O75145 1194 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 MSX1P28360 303 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 SCNN1AP37088 669 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 E4F1Q66K89 784 aaPredicted RBP6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 KCNV1Q6PIU1 500 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 FOXR1Q6PIV2 292 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 TRIM65Q6PJ69 517 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 LRRC31Q6UY01 552 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 CAPN12Q6ZSI9 719 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 TADA2BQ86TJ2 420 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 ANKRD20A12PQ8NF67 263 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 KAT2BQ92831 832 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 ARGLU1Q9NWB6 273 aaPredicted RBP6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 IQGAP3Q86VI3 1631 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 TTC41PQ6P2S7 1318 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 SALL3Q9BXA9 1300 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 ADGRL3Q9HAR2 1447 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 ATP10DQ9P241 1426 aa6.16□□□□□ -1.42
LSM3P2-201ENST00000551246 HECW2Q9P2P5 1572 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 MYO3AQ8NEV4 1616 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 KDM5AP29375 1690 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 FANCGO15287 622 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 POLR3GO15318 223 aaPredicted RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 PPFIA4O75335 1185 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 F13A1P00488 732 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 GNAI3P08754 354 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 ERCC3P19447 782 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 HNRNPH1P31943 449 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 USP5P45974 858 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms