RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 TAF5LO75529 589 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 TBC1D8O95759 1140 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 FDX1P10109 184 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 IGHMBP2P38935 993 aaKnown RBP11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 GTF2IP78347 998 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 CHRNDQ07001 517 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 MSS51Q4VC12 460 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 HELBQ8NG08 1087 aaPredicted RBP11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 DNAAF4Q8WXU2 420 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 R3HDMLQ9H3Y0 253 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 LEMD3Q9Y2U8 911 aa11.12□□□□□ -0.63
ATP2B1-207ENST00000550716 IL16Q14005 1332 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 MOXD2PA6NHM9 499 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 NDUFV2P19404 249 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 FOXO4P98177 505 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 PTPN12Q05209 780 aaKnown RBP11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 TTLL5Q6EMB2 1281 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 ZNF296Q8WUU4 475 aaPredicted RBP11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 JAG2Q9Y219 1238 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 MYH3P11055 1940 aa11.11□□□□□ -0.63
ATP2B1-207ENST00000550716 MYO3BQ8WXR4 1341 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 VAMP4O75379 141 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 EXOSC9Q06265 439 aaKnown RBP11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 SYMPKQ92797 1274 aaKnown RBP11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 USB1Q9BQ65 265 aaKnown RBP11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 CD209Q9NNX6 404 aa11.1□□□□□ -0.63
ATP2B1-207ENST00000550716 F8W031 263 aaPredicted RBP11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 KCNJ4P48050 445 aa11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 PCDHGC3Q9UN70 934 aa11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 FCF1Q9Y324 198 aaKnown RBP11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
ATP2B1-207ENST00000550716 A0A1B0GUL6 1792 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 CLRN2A0PK11 232 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 ANKRD18BA2A2Z9 1011 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 TM4SF4P48230 202 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 LDLRAD1Q5T700 205 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 ANGEL1Q9UNK9 670 aaKnown RBP11.08□□□□□ -0.64
ATP2B1-207ENST00000550716 PDE4DIPQ5VU43 2346 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 GPR25O00155 361 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
ATP2B1-207ENST00000550716 IL1R1P14778 569 aa11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 NF2P35240 595 aa11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 DLGAP5Q15398 846 aa11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 CFAP100Q494V2 611 aa11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 EMID1Q96A84 441 aaPredicted RBP11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 PRMT6Q96LA8 375 aaPredicted RBP11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
ATP2B1-207ENST00000550716 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 PLIN1O60240 522 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 GJA5P36382 358 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 SLC19A1P41440 591 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 NBPF12Q5TAG4 269 aaPredicted RBP11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 WDR63Q8IWG1 891 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 MTMR14Q8NCE2 650 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 KAZALD1Q96I82 304 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 PUS3Q9BZE2 481 aaKnown RBP11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 IRX2Q9BZI1 471 aaPredicted RBP11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 MKI67P46013 3256 aaKnown RBP11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 BRCA2P51587 3418 aa11.05□□□□□ -0.64
ATP2B1-207ENST00000550716 CENPFP49454 3210 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 GRM8O00222 908 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 CAP1Q01518 475 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 SREBF2Q12772 1141 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 GRIK5Q16478 980 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 MAP3K11Q16584 847 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 ZNF804AQ7Z570 1209 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 SUCLG2Q96I99 432 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 WNK4Q96J92 1243 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 CFHR5Q9BXR6 569 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 VEZTQ9HBM0 779 aa11.04□□□□□ -0.64
ATP2B1-207ENST00000550716 DXOO77932 396 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms