RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MZF1P28698 734 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-213ENST00000550629 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
SCAF11-213ENST00000550629 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-213ENST00000550629 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
SCAF11-213ENST00000550629 PDE12Q6L8Q7 609 aaKnown RBP7.98□□□□□ -1.13
SCAF11-213ENST00000550629 WAPLQ7Z5K2 1190 aa7.98□□□□□ -1.13
SCAF11-213ENST00000550629 PUS7Q96PZ0 661 aaKnown RBP7.98□□□□□ -1.13
SCAF11-213ENST00000550629 TESK2Q96S53 571 aa7.98□□□□□ -1.13
SCAF11-213ENST00000550629 C19orf44Q9H6X5 657 aa7.98□□□□□ -1.13
SCAF11-213ENST00000550629 TMEM63CQ9P1W3 806 aa7.98□□□□□ -1.13
SCAF11-213ENST00000550629 QRICH2Q9H0J4 1663 aa7.98□□□□□ -1.13
SCAF11-213ENST00000550629 PLEKHH1Q9ULM0 1364 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 A6NHS1 94 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 FAM13AO94988 1023 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 CYP2E1P05181 493 aaPredicted RBP7.97□□□□□ -1.13
SCAF11-213ENST00000550629 RPLP1P05386 114 aaKnown RBP7.97□□□□□ -1.13
SCAF11-213ENST00000550629 AAMPQ13685 434 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 LRP8Q14114 963 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 B4GALNT3Q6L9W6 998 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 ALKBH2Q6NS38 261 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 ZNF438Q7Z4V0 828 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 POLIQ9UNA4 740 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 EVC2Q86UK5 1308 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 MSH6P52701 1360 aa7.97□□□□□ -1.13
SCAF11-213ENST00000550629 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-213ENST00000550629 PCSK2P16519 638 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 HYAL2Q12891 473 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 C8orf34Q49A92 452 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 XKR5Q6UX68 686 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 RBSNQ9H1K0 784 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 CNTN3Q9P232 1028 aa7.96□□□□□ -1.14
SCAF11-213ENST00000550629 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
SCAF11-213ENST00000550629 NALCNQ8IZF0 1738 aa7.95□□□□□ -1.14
SCAF11-213ENST00000550629 SERPINB4P48594 390 aa7.95□□□□□ -1.14
SCAF11-213ENST00000550629 TMF1P82094 1093 aa7.95□□□□□ -1.14
SCAF11-213ENST00000550629 GDF6Q6KF10 455 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-213ENST00000550629 TULP4Q9NRJ4 1543 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 FZD6O60353 706 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 KIF4AO95239 1232 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 ATF3P18847 181 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 ATP11AP98196 1134 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 SAFB2Q14151 953 aaKnown RBP eCLIP7.94□□□□□ -1.14
SCAF11-213ENST00000550629 DTWD1Q8N5C7 304 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 C1orf127Q8N9H9 656 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 TTC16Q8NEE8 873 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 CCDC87Q9NVE4 849 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 EGFL7Q9UHF1 273 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 TRIM33Q9UPN9 1127 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.94□□□□□ -1.14
SCAF11-213ENST00000550629 NINLQ9Y2I6 1382 aa7.94□□□□□ -1.14
SCAF11-213ENST00000550629 ICMTO60725 284 aa7.93□□□□□ -1.14
SCAF11-213ENST00000550629 IL22RA1Q8N6P7 574 aa7.93□□□□□ -1.14
SCAF11-213ENST00000550629 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
SCAF11-213ENST00000550629 CDK19Q9BWU1 502 aa7.93□□□□□ -1.14
SCAF11-213ENST00000550629 KANSL3Q9P2N6 904 aa7.93□□□□□ -1.14
SCAF11-213ENST00000550629 XIRP1Q702N8 1843 aaKnown RBP7.93□□□□□ -1.14
SCAF11-213ENST00000550629 DISP3Q9P2K9 1392 aa7.93□□□□□ -1.14
SCAF11-213ENST00000550629 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
SCAF11-213ENST00000550629 PDE4CQ08493 712 aa7.92□□□□□ -1.14
SCAF11-213ENST00000550629 ECM1Q16610 540 aa7.92□□□□□ -1.14
SCAF11-213ENST00000550629 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
SCAF11-213ENST00000550629 CEP120Q8N960 986 aa7.92□□□□□ -1.14
SCAF11-213ENST00000550629 HIRIP3Q9BW71 556 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-213ENST00000550629 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
SCAF11-213ENST00000550629 H3BRB1 525 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-213ENST00000550629 CES1P23141 567 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 CEP135Q66GS9 1140 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 NCAPG2Q86XI2 1143 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-213ENST00000550629 TUT1Q9H6E5 874 aaKnown RBP7.91□□□□□ -1.14
SCAF11-213ENST00000550629 SALL4Q9UJQ4 1053 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 MST1RQ04912 1400 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 ATP7BP35670 1465 aa7.91□□□□□ -1.14
SCAF11-213ENST00000550629 C1orf167Q5SNV9 1468 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 CCDC7Q96M83 1385 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 KIF7Q2M1P5 1343 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCAF11-213ENST00000550629 USP5P45974 858 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 IREB2P48200 963 aaKnown RBP7.9□□□□□ -1.14
SCAF11-213ENST00000550629 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 WFDC12Q8WWY7 111 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 CHRDQ9H2X0 955 aa7.9□□□□□ -1.14
SCAF11-213ENST00000550629 ITSN1Q15811 1721 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 TOPAZ1Q8N9V7 1692 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 USP32Q8NFA0 1604 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 WASHC2AQ641Q2 1341 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 PRR36Q9H6K5 1346 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-213ENST00000550629 TOM1O60784 492 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 TNFRSF21O75509 655 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 ACPPP15309 386 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 GLYCTKQ8IVS8 523 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 GJD3Q8N144 294 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 KIF1AQ12756 1690 aa7.89□□□□□ -1.15
SCAF11-213ENST00000550629 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
SCAF11-213ENST00000550629 POLR3AO14802 1390 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms