RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 ENTPD3O75355 529 aa14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 PTPRAP18433 802 aa14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 ZEB1P37275 1124 aaPredicted RBP14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 IL15P40933 162 aaPredicted RBP14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 TIMM10P62072 90 aa14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 PRRT2Q7Z6L0 340 aaPredicted RBP14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 SCYL3Q8IZE3 742 aa14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 AFG3L2Q9Y4W6 797 aa14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 DOCK2Q92608 1830 aa14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 GRK4P32298 578 aa14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 RHBDL3P58872 404 aa14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 FAM163AQ96GL9 167 aaPredicted RBP14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 ZHX2Q9Y6X8 837 aa14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 PDS5AQ29RF7 1337 aaKnown RBP14.41□□□□□ -0.1
SMARCD1-208ENST00000550280 FMNL1O95466 1100 aaPredicted RBP14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 CCL5P13501 91 aa14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 BTDP43251 543 aa14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 GJA8P48165 433 aa14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 TNNQ9UQP3 1299 aa14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 PHIPQ8WWQ0 1821 aa14.4□□□□□ -0.1
SMARCD1-208ENST00000550280 A0A1B0GUL7 405 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 FAM196BA6NMK8 535 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 GJB1P08034 283 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 TFCP2Q12800 502 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 RRP1BQ14684 758 aaKnown RBP14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 RAET1EQ8TD07 263 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 XAGE2Q96GT9 111 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 CEP290O15078 2479 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 MROH7-TTC4A0A0A0MT08 1334 aa14.39□□□□□ -0.11
SMARCD1-208ENST00000550280 TRIOBPQ9H2D6 2365 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 RARSP54136 660 aaKnown RBP14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 MECOMQ03112 1051 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 PICALMQ13492 652 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 MTX1Q13505 466 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 UNC93B1Q9H1C4 597 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 PRO3102Q9H379 93 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 ABCF2Q9UG63 623 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 PTPRFP10586 1907 aa14.38□□□□□ -0.11
SMARCD1-208ENST00000550280 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 ELNP15502 786 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 HOXD10P28358 340 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 FCGRTP55899 365 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 TREML2Q5T2D2 321 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 GADL1Q6ZQY3 521 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 DZIP1Q86YF9 867 aaKnown RBP14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 HMG20BQ9P0W2 317 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 RBM27Q9P2N5 1060 aaKnown RBP14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 DOCK1Q14185 1865 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 AK9Q5TCS8 1911 aa14.37□□□□□ -0.11
SMARCD1-208ENST00000550280 TRIM75PA6NK02 468 aa14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 FLT3LGP49771 235 aa14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 FASTKD5Q7L8L6 764 aaKnown RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 ZSCAN29Q8IWY8 852 aaPredicted RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 ZGPATQ8N5A5 531 aaKnown RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 NSUN4Q96CB9 384 aaKnown RBP14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
SMARCD1-208ENST00000550280 MGAMO43451 1857 aa14.35□□□□□ -0.11
SMARCD1-208ENST00000550280 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
SMARCD1-208ENST00000550280 SLAIN1Q8ND83 568 aa14.35□□□□□ -0.11
SMARCD1-208ENST00000550280 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
SMARCD1-208ENST00000550280 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
SMARCD1-208ENST00000550280 PNMA6EA0A0J9YXQ4 647 aa14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 ADCY3O60266 1144 aa14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 TBC1D12O60347 775 aa14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 INHAP05111 366 aa14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 JAG1P78504 1218 aa14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 NKX2-3Q8TAU0 364 aa14.34□□□□□ -0.11
SMARCD1-208ENST00000550280 COL2A1P02458 1487 aaPredicted RBP14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 SGPL1O95470 568 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 MCAMP43121 646 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 IRF5Q13568 498 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 MVPQ14764 893 aaKnown RBP14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 SHROOM1Q2M3G4 852 aaPredicted RBP14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 ERICH6Q7L0X2 663 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 ANKRD13CQ8N6S4 541 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 SPATA5Q8NB90 893 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 DPF3Q92784 378 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 BIN2Q9UBW5 565 aaPredicted RBP14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 SIPA1L1O43166 1804 aa14.33□□□□□ -0.12
SMARCD1-208ENST00000550280 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 TNPO2O14787 897 aaKnown RBP14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 FARP2O94887 1054 aaPredicted RBP14.32□□□□□ -0.12
SMARCD1-208ENST00000550280 TRIM27P14373 513 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms