RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 PSAPP07602 524 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 U2AF1L5P0DN76 240 aaPredicted RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 HOXD8P13378 290 aaPredicted RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 HOXB4P17483 251 aaPredicted RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 NRLP54845 237 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 RAC1P63000 192 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 U2AF1Q01081 240 aaKnown RBP eCLIP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 PLAURQ03405 335 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 EXOSC9Q06265 439 aaKnown RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 MCTP1Q6DN14 999 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 ALKBH2Q6NS38 261 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 GPAT2Q6NUI2 795 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 DTWD1Q8N5C7 304 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 TTC16Q8NEE8 873 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 ZNF417Q8TAU3 575 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 TRPM4Q8TD43 1214 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 PIBF1Q8WXW3 757 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 TTC9Q92623 222 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 PLEKHF1Q96S99 279 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 ZNF587Q96SQ5 575 aaPredicted RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 STIM2Q9P246 746 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 HCN2Q9UL51 889 aa4.58□□□□□ -1.68
RAB5B-207ENST00000549915 NOB1Q9ULX3 412 aaKnown RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 RTCBQ9Y3I0 505 aaKnown RBP4.58□□□□□ -1.68
RAB5B-207ENST00000549915 HECW2Q9P2P5 1572 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 LRRC7Q96NW7 1537 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 FAM135BQ49AJ0 1406 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 PNPLA6Q8IY17 1366 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 XYLBO75191 536 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 RGS9O75916 674 aaPredicted RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 PTMAP06454 111 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 RBM10P98175 930 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 XPCQ01831 940 aaPredicted RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 TBC1D8BQ0IIM8 1120 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 TRIM28Q13263 835 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 SYCP1Q15431 976 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 PLA2G4EQ3MJ16 856 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 TTC22Q5TAA0 569 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 DHX32Q7L7V1 743 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 CREBRFQ8IUR6 639 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 MICALL1Q8N3F8 863 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 HELQQ8TDG4 1101 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 IL17RAQ96F46 866 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 INTS4Q96HW7 963 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 PLVAPQ9BX97 442 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 API5Q9BZZ5 524 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 TSPY26PQ9H489 355 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 C14orf93Q9H972 538 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 SRA1Q9HD15 236 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 DIAPH3Q9NSV4 1193 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 SPTLC3Q9NUV7 552 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 DNAJB12Q9NXW2 375 aaKnown RBP4.57□□□□□ -1.68
RAB5B-207ENST00000549915 LRFN2Q9ULH4 789 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 PIK3C2BO00750 1634 aa4.57□□□□□ -1.68
RAB5B-207ENST00000549915 CDK12Q9NYV4 1490 aaPredicted RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 CPSF1Q10570 1443 aaKnown RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 ADGRF5Q8IZF2 1346 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 LGR5O75473 907 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 ALBP02768 609 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 ZSCAN20P17040 1043 aaPredicted RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 ANAPC15P60006 121 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 FAM193AP78312 1265 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 LMOD3Q0VAK6 560 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 CHAF1AQ13111 956 aaPredicted RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 CUL4AQ13619 759 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 ANKRD45Q5TZF3 282 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 RAB44Q7Z6P3 723 aaPredicted RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 RGL4Q8IZJ4 473 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 PDCL2Q8N4E4 241 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 TMEM87AQ8NBN3 555 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 GPT2Q8TD30 523 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 TSR2Q969E8 191 aaKnown RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 FEZ1Q99689 392 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 MKNK1Q9BUB5 465 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 USP26Q9BXU7 913 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 JPH1Q9HDC5 661 aaPredicted RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 TLR7Q9NYK1 1049 aaKnown RBP4.56□□□□□ -1.68
RAB5B-207ENST00000549915 KIF3AQ9Y496 699 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 UGGT1Q9NYU2 1555 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 ABCC3O15438 1527 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 NEXMIFQ5QGS0 1516 aa4.56□□□□□ -1.68
RAB5B-207ENST00000549915 SYCE3A1L190 88 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 FAM177BA6PVY3 158 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 GOLGA6L6A8MZA4 724 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 PRPF40AO75400 957 aaKnown RBP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 BRD1O95696 1058 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 GHRHP01286 108 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 ELNP15502 786 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 MCCP23508 829 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 ZAP70P43403 619 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 USP5P45974 858 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 GNAI1P63096 354 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 NRG1Q02297 640 aaPredicted RBP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 GABPB1Q06547 395 aaPredicted RBP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 EHHADHQ08426 723 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 SF3B2Q13435 895 aaKnown RBP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 PDE12Q6L8Q7 609 aaKnown RBP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 PSAPL1Q6NUJ1 521 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 ELMSAN1Q6PJG2 1045 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms