RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 SH3RF3Q8TEJ3 882 aaPredicted RBP28.89■■■□□ 2.21
TGFBR1-207ENST00000549766 FOXD4L4Q8WXT5 416 aaPredicted RBP28.89■■■□□ 2.21
TGFBR1-207ENST00000549766 KIF13BQ9NQT8 1826 aa28.89■■■□□ 2.21
TGFBR1-207ENST00000549766 CCT2P78371 535 aaKnown RBP28.88■■■□□ 2.21
TGFBR1-207ENST00000549766 LY9Q9HBG7 655 aa28.88■■■□□ 2.21
TGFBR1-207ENST00000549766 CYP2D7A0A087X1C5 515 aa28.87■■■□□ 2.21
TGFBR1-207ENST00000549766 GOLGA6L22H0YM25 854 aa28.87■■■□□ 2.21
TGFBR1-207ENST00000549766 LARP1BQ659C4 914 aaKnown RBP28.87■■■□□ 2.21
TGFBR1-207ENST00000549766 CERS5Q8N5B7 392 aa28.87■■■□□ 2.21
TGFBR1-207ENST00000549766 NOL10Q9BSC4 688 aaKnown RBP28.87■■■□□ 2.21
TGFBR1-207ENST00000549766 LAMB1P07942 1786 aa28.87■■■□□ 2.21
TGFBR1-207ENST00000549766 KCNA3P22001 575 aa28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 NCOA5Q9HCD5 579 aaKnown RBP28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 F13A1P00488 732 aa28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 BTDP43251 543 aa28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 HMGN5P82970 282 aaKnown RBP28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 GRIPAP1Q4V328 841 aa28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.86■■■□□ 2.21
TGFBR1-207ENST00000549766 MCTP1Q6DN14 999 aa28.85■■■□□ 2.21
TGFBR1-207ENST00000549766 GOLGA8BA8MQT2 603 aa28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 TMEM67Q5HYA8 995 aa28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 RRP12Q5JTH9 1297 aaKnown RBP28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 TTLL6Q8N841 843 aa28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 ESR2Q92731 530 aa28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 SENP2Q9HC62 589 aa28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 ZNF219Q9P2Y4 722 aaPredicted RBP28.84■■■□□ 2.21
TGFBR1-207ENST00000549766 IFIT3O14879 490 aaKnown RBP28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 ORC4O43929 436 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 TRAK2O60296 914 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 PLCG2P16885 1265 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 RHBDL3P58872 404 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 FKBP1AP62942 108 aaKnown RBP28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 APOA5Q6Q788 366 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 NAP1L2Q9ULW6 460 aaPredicted RBP28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 PTPDC1A2A3K4 754 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 G3V3G9 751 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 USP5P45974 858 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 DCAF8Q5TAQ9 597 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 SUPT20HQ8NEM7 779 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 DBNDD1Q9H9R9 158 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 TOMM22Q9NS69 142 aa28.83■■■□□ 2.21
TGFBR1-207ENST00000549766 DHX16O60231 1041 aaKnown RBP28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 DPEP1P16444 411 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 EVX2Q03828 476 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 KIAA2012Q0VF49 1180 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 C12orf60Q5U649 245 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 STK11IPQ8N1F8 1099 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 CHAMP1Q96JM3 812 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 LMBRD1Q9NUN5 540 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 MCM9Q9NXL9 1143 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 DAGLAQ9Y4D2 1042 aa28.82■■■□□ 2.2
TGFBR1-207ENST00000549766 ROBO3Q96MS0 1386 aa28.81■■■□□ 2.2
TGFBR1-207ENST00000549766 USP17L8P0C7I0 530 aa28.81■■■□□ 2.2
TGFBR1-207ENST00000549766 SART3Q15020 963 aaKnown RBP28.81■■■□□ 2.2
TGFBR1-207ENST00000549766 MTFR1LQ9H019 292 aa28.81■■■□□ 2.2
TGFBR1-207ENST00000549766 NID2Q14112 1375 aa28.81■■■□□ 2.2
TGFBR1-207ENST00000549766 C21orf2O43822 256 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 CYP2D6P10635 497 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 STRIP1Q5VSL9 837 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 TGFBRAP1Q8WUH2 860 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 ZNF646O15015 1829 aaPredicted RBP28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 VPS37CA5D8V6 355 aaPredicted RBP28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 ECE2O60344 883 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 ZBTB7AO95365 584 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 SLC3A2P08195 630 aaKnown RBP28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 NT5C2P49902 561 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 SEC23AQ15436 765 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 SKOR2Q2VWA4 1001 aaPredicted RBP28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 TMTC2Q8N394 836 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 FBXW7Q969H0 707 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 DDX11Q96FC9 970 aa28.8■■■□□ 2.2
TGFBR1-207ENST00000549766 CDK5RAP2Q96SN8 1893 aa28.79■■■□□ 2.2
TGFBR1-207ENST00000549766 CDC37L1Q7L3B6 337 aa28.79■■■□□ 2.2
TGFBR1-207ENST00000549766 MXD3Q9BW11 206 aa28.79■■■□□ 2.2
TGFBR1-207ENST00000549766 ATP6V1DQ9Y5K8 247 aa28.79■■■□□ 2.2
TGFBR1-207ENST00000549766 NAV1Q8NEY1 1877 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 DDX60LQ5H9U9 1706 aaKnown RBP28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 FDPSP14324 419 aaKnown RBP28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 TGFB2P61812 414 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 WTAPQ15007 396 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 CCDC93Q567U6 631 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 FAM184AQ8NB25 1140 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 KCNQ5Q9NR82 932 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 TTF2Q9UNY4 1162 aaKnown RBP28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 KIF3AQ9Y496 699 aa28.78■■■□□ 2.2
TGFBR1-207ENST00000549766 ERICH2A1L162 156 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 ZBTB43O43298 467 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 METAP2P50579 478 aaKnown RBP eCLIP28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 AOC3Q16853 763 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 DACT2Q5SW24 774 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 HHIPL2Q6UWX4 724 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 NFXL1Q6ZNB6 911 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 TEX11Q8IYF3 940 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 RTKN2Q8IZC4 609 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 PSMD1Q99460 953 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 ZKSCAN3Q9BRR0 538 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 RCAN1P53805 252 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 PDE4BQ07343 736 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 UBAC1Q9BSL1 405 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 MRIQ9BWK5 157 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms