RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 ANKRD30BQ9BXX2 1392 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 A0A096LPE4 126 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 A0A1W2PPZ6 126 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 PDE2AO00408 941 aaPredicted RBP5.71□□□□□ -1.5
USP25-210ENST00000549362 SMNDC1O75940 238 aaKnown RBP eCLIP5.71□□□□□ -1.5
USP25-210ENST00000549362 EIF2AK2P19525 551 aaKnown RBP5.71□□□□□ -1.5
USP25-210ENST00000549362 GRIA4P48058 902 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 MBTPS1Q14703 1052 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 SOGA3Q5TF21 947 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 ZNF468Q5VIY5 522 aaPredicted RBP5.71□□□□□ -1.5
USP25-210ENST00000549362 CEP135Q66GS9 1140 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 TMEM102Q8N9M5 508 aaPredicted RBP5.71□□□□□ -1.5
USP25-210ENST00000549362 TRIM56Q9BRZ2 755 aaKnown RBP5.71□□□□□ -1.5
USP25-210ENST00000549362 ITSN2Q9NZM3 1697 aa5.71□□□□□ -1.5
USP25-210ENST00000549362 KIAA0586Q9BVV6 1533 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 METTL12A8MUP2 240 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 ATF4P18848 351 aaPredicted RBP5.7□□□□□ -1.5
USP25-210ENST00000549362 GJA8P48165 433 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 GPLD1P80108 840 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 SNAP47Q5SQN1 464 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 SYT9Q86SS6 491 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 FAM9BQ8IZU0 186 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 ZNF296Q8WUU4 475 aaPredicted RBP5.7□□□□□ -1.5
USP25-210ENST00000549362 NXPE3Q969Y0 559 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 PBX4Q9BYU1 374 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 RASSF4Q9H2L5 321 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 PRDM6Q9NQX0 595 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 DNAJB12Q9NXW2 375 aaKnown RBP5.7□□□□□ -1.5
USP25-210ENST00000549362 IFT140Q96RY7 1462 aa5.7□□□□□ -1.5
USP25-210ENST00000549362 MAGI3Q5TCQ9 1506 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 ANKRD30AQ9BXX3 1397 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 SMG6Q86US8 1419 aaKnown RBP5.69□□□□□ -1.5
USP25-210ENST00000549362 CELA3AP09093 270 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 HOXD8P13378 290 aaPredicted RBP5.69□□□□□ -1.5
USP25-210ENST00000549362 CPB1P15086 417 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 ITPKAP23677 461 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 CANXP27824 592 aaKnown RBP5.69□□□□□ -1.5
USP25-210ENST00000549362 LIG3P49916 1009 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 ZNF157P51786 506 aaPredicted RBP5.69□□□□□ -1.5
USP25-210ENST00000549362 PCBP4P57723 403 aaKnown RBP5.69□□□□□ -1.5
USP25-210ENST00000549362 ATP11AP98196 1134 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 PPP2R3AQ06190 1150 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 TTBK2Q6IQ55 1244 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 FAM35AQ86V20 835 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 MCF2L2Q86YR7 1114 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 TRPM4Q8TD43 1214 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 CPLX3Q8WVH0 158 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 HHIPQ96QV1 700 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 BHLHE41Q9C0J9 482 aaPredicted RBP5.69□□□□□ -1.5
USP25-210ENST00000549362 ADAMTS1Q9UHI8 967 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 TLR6Q9Y2C9 796 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 SAMM50Q9Y512 469 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 TEX14Q8IWB6 1497 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 MRC2Q9UBG0 1479 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 ADGBQ8N7X0 1667 aa5.69□□□□□ -1.5
USP25-210ENST00000549362 ABCC5O15440 1437 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 TROQ12816 1431 aaPredicted RBP5.68□□□□□ -1.5
USP25-210ENST00000549362 SPATA31E1Q6ZUB1 1445 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 KIAA1107Q9UPP5 1409 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 KIAA0556O60303 1618 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 RAPGEF6Q8TEU7 1601 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 ZBTB42B2RXF5 422 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 PF4P02776 101 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 NASPP49321 788 aaPredicted RBP5.68□□□□□ -1.5
USP25-210ENST00000549362 JAG1P78504 1218 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 RPS26P11Q5JNZ5 115 aaPredicted RBP5.68□□□□□ -1.5
USP25-210ENST00000549362 GIMAP6Q6P9H5 292 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 ELMSAN1Q6PJG2 1045 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 SLC51AQ86UW1 340 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 CKAP2LQ8IYA6 745 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 ANKRD24Q8TF21 1146 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 SEC16BQ96JE7 1060 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 NECAB3Q96P71 396 aaPredicted RBP5.68□□□□□ -1.5
USP25-210ENST00000549362 SEC31BQ9NQW1 1179 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 TMEM39AQ9NV64 488 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 NUDCQ9Y266 331 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 EFR3BQ9Y2G0 817 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 ADGRL2O95490 1459 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 KIF7Q2M1P5 1343 aa5.68□□□□□ -1.5
USP25-210ENST00000549362 KIF14Q15058 1648 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 CARMIL2Q6F5E8 1435 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 DENND4BO75064 1496 aaPredicted RBP5.67□□□□□ -1.5
USP25-210ENST00000549362 M0R082 166 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 NFKBIEO00221 500 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 ANP32AP39687 249 aaKnown RBP5.67□□□□□ -1.5
USP25-210ENST00000549362 CAMK2GQ13555 558 aaPredicted RBP5.67□□□□□ -1.5
USP25-210ENST00000549362 RALBP1Q15311 655 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 CCDC144BQ3MJ40 725 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 FBXL19Q6PCT2 694 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 PHC3Q8NDX5 983 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 ZNF417Q8TAU3 575 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 BSNDQ8WZ55 320 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 NKD1Q969G9 470 aa5.67□□□□□ -1.5
USP25-210ENST00000549362 LENG1Q96BZ8 264 aaPredicted RBP5.67□□□□□ -1.5
USP25-210ENST00000549362 ZNF587Q96SQ5 575 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms