RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 SURF6O75683 361 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 GRK4P32298 578 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 BCAMP50895 628 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 TFCP2Q12800 502 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 MOGSQ13724 837 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 ANKRD23Q86SG2 305 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 NKX2-3Q8TAU0 364 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 TBC1D22AQ8WUA7 517 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 IQSEC3Q9UPP2 1182 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 KCNH4Q9UQ05 1017 aa19.38■□□□□ 0.69
CHMP1A-206ENST00000549139 INPP5BP32019 993 aa19.37■□□□□ 0.69
CHMP1A-206ENST00000549139 HOOK2Q96ED9 719 aa19.37■□□□□ 0.69
CHMP1A-206ENST00000549139 PDHXO00330 501 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 CCL5P13501 91 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 HOXD10P28358 340 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 TIMM10P62072 90 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 CHAF1AQ13111 956 aaPredicted RBP19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 RAET1EQ8TD07 263 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 ZNF341Q9BYN7 854 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 ZNF112Q9UJU3 913 aa19.36■□□□□ 0.69
CHMP1A-206ENST00000549139 MYPNQ86TC9 1320 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 A0A1B0GUL7 405 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 ZBTB22O15209 634 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 DCAF15Q66K64 600 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 HTATIP2Q9BUP3 242 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-206ENST00000549139 HMMRO75330 724 aa19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 BCRP11274 1271 aa19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 OS9Q13438 667 aaPredicted RBP19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 HHIPL2Q6UWX4 724 aa19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 RNF208Q9H0X6 261 aa19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 GPR108Q9NPR9 543 aa19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 GNL3LQ9NVN8 582 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 SUGT1Q9Y2Z0 365 aa19.34■□□□□ 0.69
CHMP1A-206ENST00000549139 MGAMO43451 1857 aa19.33■□□□□ 0.69
CHMP1A-206ENST00000549139 FMNL1O95466 1100 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-206ENST00000549139 PRKCZQ05513 592 aa19.33■□□□□ 0.68
CHMP1A-206ENST00000549139 SIRT2Q8IXJ6 389 aa19.33■□□□□ 0.68
CHMP1A-206ENST00000549139 XAGE2Q96GT9 111 aa19.33■□□□□ 0.68
CHMP1A-206ENST00000549139 DLL1O00548 723 aa19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 GPAT2Q6NUI2 795 aa19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 U2AF1L4Q8WU68 220 aaKnown RBP19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 FAM151AQ8WW52 585 aa19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 NEUROD6Q96NK8 337 aa19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 NR2E3Q9Y5X4 410 aa19.32■□□□□ 0.68
CHMP1A-206ENST00000549139 MAST3O60307 1309 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 DOCK3Q8IZD9 2030 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 SEMA3EO15041 775 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 ADORA1P30542 326 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 NOL9Q5SY16 702 aaKnown RBP19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 CCDC102BQ68D86 513 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 ERC1Q8IUD2 1116 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
CHMP1A-206ENST00000549139 A0A1W2PPC1 479 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 SOX1O00570 391 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 FARP2O94887 1054 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 SGPL1O95470 568 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 PHKA1P46020 1223 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 UBXN2AP68543 259 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 SLAIN1Q8ND83 568 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 SLC17A8Q8NDX2 589 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 WDR66Q8TBY9 1149 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 GABRQQ9UN88 632 aa19.3■□□□□ 0.68
CHMP1A-206ENST00000549139 AK9Q5TCS8 1911 aa19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 CYP2C8P10632 490 aa19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 FCGRTP55899 365 aa19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 TNNI3KQ59H18 835 aa19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 PARK7Q99497 189 aaKnown RBP19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 BIN2Q9UBW5 565 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 EXOC6BQ9Y2D4 811 aa19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 FPGT-TNNI3KV9GXZ4 949 aa19.29■□□□□ 0.68
CHMP1A-206ENST00000549139 CXCL11O14625 94 aa19.28■□□□□ 0.68
CHMP1A-206ENST00000549139 NFIAQ12857 509 aa19.28■□□□□ 0.68
CHMP1A-206ENST00000549139 CDC42EP5Q6NZY7 148 aa19.28■□□□□ 0.68
CHMP1A-206ENST00000549139 ALPK3Q96L96 1907 aa19.27■□□□□ 0.68
CHMP1A-206ENST00000549139 GORABQ5T7V8 394 aa19.27■□□□□ 0.68
CHMP1A-206ENST00000549139 DAGLAQ9Y4D2 1042 aa19.27■□□□□ 0.68
CHMP1A-206ENST00000549139 PDS5AQ29RF7 1337 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 RAB11FIP3O75154 756 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 TCP10Q12799 353 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 RHPN1Q8TCX5 695 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 LRCH3Q96II8 777 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 CRBNQ96SW2 442 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 FAM198AQ9UFP1 575 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 ATRNL1Q5VV63 1379 aa19.26■□□□□ 0.67
CHMP1A-206ENST00000549139 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 PHF20L1A8MW92 1017 aa19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 ADCY3O60266 1144 aa19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 ARID4AP29374 1257 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 PXYLP1Q8TE99 480 aa19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 EAF2Q96CJ1 260 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 KIF1BPQ96EK5 621 aa19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 PTPRFP10586 1907 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms