RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SHDQ96IW2 340 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 SEC16BQ96JE7 1060 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 DNAJC7Q99615 494 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 TRAK1Q9UPV9 953 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 CEP170BQ9Y4F5 1589 aaPredicted RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 SOS2Q07890 1332 aaPredicted RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 BNIP3LO60238 219 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 CDK8P49336 464 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 PPP2R5EQ16537 467 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 LARP1BQ659C4 914 aaKnown RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 SRRTQ9BXP5 876 aaKnown RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 ZC3H12CQ9C0D7 883 aaKnown RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 FANCLQ9NW38 375 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 PPP4R2Q9NY27 417 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 U2SURPO15042 1029 aaKnown RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 SOX9P48436 509 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 PTPN11Q06124 597 aaPredicted RBP5.16□□□□□ -1.58
APAF1-208ENST00000549007 EFHC2Q5JST6 749 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 LILRB2Q8N423 598 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 SH3TC2Q8TF17 1288 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 PFDN2Q9UHV9 154 aa5.16□□□□□ -1.58
APAF1-208ENST00000549007 A2ML1A8K2U0 1454 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 NFKBIEO00221 500 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 PSAPP07602 524 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 LTKP29376 864 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 NFE2L2Q16236 605 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 C21orf62-AS1Q17RA5 79 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 DHX32Q7L7V1 743 aaKnown RBP5.15□□□□□ -1.58
APAF1-208ENST00000549007 FILIP1Q7Z7B0 1213 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 CEP120Q8N960 986 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 NECAB3Q96P71 396 aaPredicted RBP5.15□□□□□ -1.58
APAF1-208ENST00000549007 ANTXR1Q9H6X2 564 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 SLC52A1Q9NWF4 448 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 PLA2G2EQ9NZK7 142 aa5.15□□□□□ -1.58
APAF1-208ENST00000549007 MYO5BQ9ULV0 1848 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 A0A0G2JS52 829 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 ZBTB42B2RXF5 422 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 EFSO43281 561 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 CHMP4BP1P59074 171 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 PTPROQ16827 1216 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 NKD1Q969G9 470 aa5.15□□□□□ -1.59
APAF1-208ENST00000549007 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.15□□□□□ -1.59
APAF1-208ENST00000549007 GPC6Q9Y625 555 aaPredicted RBP5.15□□□□□ -1.59
APAF1-208ENST00000549007 NLRP1Q9C000 1473 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 hCG_2014768A0A024R1R8 64 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 A0A096LPE4 126 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 A0A1W2PPZ6 126 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 ESYT3A0FGR9 886 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 GREM1O60565 184 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 ANKRD24Q8TF21 1146 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 FERD3LQ96RJ6 166 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 LACRTQ9GZZ8 138 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 CBX8Q9HC52 389 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 R3HCC1Q9Y3T6 440 aaKnown RBP5.14□□□□□ -1.59
APAF1-208ENST00000549007 DYRK1BQ9Y463 629 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 ADGRB3O60242 1522 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 MAN1A2O60476 641 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 XRCC5P13010 732 aaKnown RBP5.14□□□□□ -1.59
APAF1-208ENST00000549007 UBAP2LQ14157 1087 aaKnown RBP5.14□□□□□ -1.59
APAF1-208ENST00000549007 POLR3GLQ9BT43 218 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 NT5C1AQ9BXI3 368 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 BRMS1Q9HCU9 246 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 IFT57Q9NWB7 429 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 SETD1BQ9UPS6 1966 aaKnown RBP5.14□□□□□ -1.59
APAF1-208ENST00000549007 MARCH6O60337 910 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 PWP1Q13610 501 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 FAM196AQ6ZSG2 479 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 THEMISQ8N1K5 641 aaPredicted RBP5.14□□□□□ -1.59
APAF1-208ENST00000549007 DCAF11Q8TEB1 546 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 UBR1Q8IWV7 1749 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 TMEM131LA2VDJ0 1609 aa5.14□□□□□ -1.59
APAF1-208ENST00000549007 RIMS2Q9UQ26 1411 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 ST8SIA5O15466 376 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 TNP2Q05952 138 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 SCARF1Q14162 830 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 DBN1Q16643 649 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 TKFCQ3LXA3 575 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 PMEPA1Q969W9 287 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 SLC26A8Q96RN1 970 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 POP1Q99575 1024 aaKnown RBP5.13□□□□□ -1.59
APAF1-208ENST00000549007 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 TLR7Q9NYK1 1049 aaKnown RBP5.13□□□□□ -1.59
APAF1-208ENST00000549007 DACH1Q9UI36 760 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 PDZRN3Q9UPQ7 1066 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 SPATA31E1Q6ZUB1 1445 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 TMEM2Q9UHN6 1383 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 ADGRF5Q8IZF2 1346 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 EIF2AK2P19525 551 aaKnown RBP5.13□□□□□ -1.59
APAF1-208ENST00000549007 CLCQ05315 142 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 WDR44Q5JSH3 913 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 AGMOQ6ZNB7 445 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 GTPBP3Q969Y2 492 aaKnown RBP5.13□□□□□ -1.59
APAF1-208ENST00000549007 PRKAG3Q9UGI9 489 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 PTSQ03393 145 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 SOGA3Q5TF21 947 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 CEP135Q66GS9 1140 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 NXPE3Q969Y0 559 aa5.13□□□□□ -1.59
APAF1-208ENST00000549007 NUCKS1Q9H1E3 243 aaKnown RBP5.13□□□□□ -1.59
APAF1-208ENST00000549007 PPM1HQ9ULR3 514 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms