RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CYP7A1P22680 504 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 MIGA1Q8NAN2 632 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 HOOK2Q96ED9 719 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 EDC3Q96F86 508 aaKnown RBP19.23■□□□□ 0.67
DDX54-205ENST00000548786 ZNF341Q9BYN7 854 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
DDX54-205ENST00000548786 DDTLA6NHG4 134 aaPredicted RBP19.22■□□□□ 0.67
DDX54-205ENST00000548786 ENTPD3O75355 529 aa19.22■□□□□ 0.67
DDX54-205ENST00000548786 INPP5BP32019 993 aa19.22■□□□□ 0.67
DDX54-205ENST00000548786 DYNLL1P63167 89 aaKnown RBP19.22■□□□□ 0.67
DDX54-205ENST00000548786 SREBF2Q12772 1141 aa19.22■□□□□ 0.67
DDX54-205ENST00000548786 OTUD5Q96G74 571 aa19.22■□□□□ 0.67
DDX54-205ENST00000548786 BOLA2Q9H3K6 86 aa19.22■□□□□ 0.67
DDX54-205ENST00000548786 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
DDX54-205ENST00000548786 SNCAIPQ9Y6H5 919 aa19.21■□□□□ 0.67
DDX54-205ENST00000548786 FAM196BA6NMK8 535 aa19.2■□□□□ 0.66
DDX54-205ENST00000548786 TBC1D8O95759 1140 aa19.2■□□□□ 0.66
DDX54-205ENST00000548786 BAG3O95817 575 aa19.2■□□□□ 0.66
DDX54-205ENST00000548786 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
DDX54-205ENST00000548786 MAP3K12Q12852 859 aa19.2■□□□□ 0.66
DDX54-205ENST00000548786 TSHZ3Q63HK5 1081 aa19.2■□□□□ 0.66
DDX54-205ENST00000548786 SAGE1Q9NXZ1 904 aa19.2■□□□□ 0.66
DDX54-205ENST00000548786 CASP8AP2Q9UKL3 1982 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 UNCXA6NJT0 531 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 TM4SF4P48230 202 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 SLC4A8Q2Y0W8 1093 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 MAPKAPK5Q8IW41 473 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
DDX54-205ENST00000548786 TGFBRAP1Q8WUH2 860 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
DDX54-205ENST00000548786 ATRNL1Q5VV63 1379 aa19.19■□□□□ 0.66
DDX54-205ENST00000548786 MANSC4A6NHS7 340 aaPredicted RBP19.18■□□□□ 0.66
DDX54-205ENST00000548786 OSBPL5Q9H0X9 879 aaPredicted RBP19.18■□□□□ 0.66
DDX54-205ENST00000548786 IGF2BP3O00425 579 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDX54-205ENST00000548786 CAPN15O75808 1086 aa19.17■□□□□ 0.66
DDX54-205ENST00000548786 PLCG2P16885 1265 aa19.17■□□□□ 0.66
DDX54-205ENST00000548786 ATP5JP18859 108 aa19.17■□□□□ 0.66
DDX54-205ENST00000548786 TTF1Q15361 905 aaPredicted RBP19.17■□□□□ 0.66
DDX54-205ENST00000548786 SLC9C2Q5TAH2 1124 aa19.17■□□□□ 0.66
DDX54-205ENST00000548786 EXOC6Q8TAG9 804 aa19.17■□□□□ 0.66
DDX54-205ENST00000548786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDX54-205ENST00000548786 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
DDX54-205ENST00000548786 SAP30BPQ9UHR5 308 aaKnown RBP19.17■□□□□ 0.66
DDX54-205ENST00000548786 CDK5RAP2Q96SN8 1893 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 SPDYE5A6NIY4 337 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 PDE6AP16499 860 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 PPP4CP60510 307 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
DDX54-205ENST00000548786 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 IFNL1Q8IU54 200 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 R3HDMLQ9H3Y0 253 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.16■□□□□ 0.66
DDX54-205ENST00000548786 FLT1P17948 1338 aa19.16■□□□□ 0.66
DDX54-205ENST00000548786 CCL15-CCL14A0A0B4J2E2 113 aa19.15■□□□□ 0.66
DDX54-205ENST00000548786 MAP4K4O95819 1239 aaPredicted RBP19.15■□□□□ 0.66
DDX54-205ENST00000548786 CCL15Q16663 113 aa19.15■□□□□ 0.66
DDX54-205ENST00000548786 ERO1BQ86YB8 467 aa19.15■□□□□ 0.66
DDX54-205ENST00000548786 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
DDX54-205ENST00000548786 HAUS7Q99871 368 aa19.15■□□□□ 0.66
DDX54-205ENST00000548786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.15■□□□□ 0.66
DDX54-205ENST00000548786 ZNF112Q9UJU3 913 aa19.15■□□□□ 0.66
DDX54-205ENST00000548786 ZNF532Q9HCE3 1301 aa19.15■□□□□ 0.66
DDX54-205ENST00000548786 PHF20L1A8MW92 1017 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 IRF6O14896 467 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 CHGBP05060 677 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 USP5P45974 858 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 BRI3BPQ8WY22 251 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 GPATCH3Q96I76 525 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 MS4A4AQ96JQ5 239 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 PTPN18Q99952 460 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 ECHDC1Q9NTX5 307 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 PALD1Q9ULE6 856 aa19.14■□□□□ 0.65
DDX54-205ENST00000548786 MAGEB6P1A0A0J9YX57 407 aa19.13■□□□□ 0.65
DDX54-205ENST00000548786 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
DDX54-205ENST00000548786 GTF2A2P52657 109 aa19.13■□□□□ 0.65
DDX54-205ENST00000548786 CCDC84Q86UT8 332 aaPredicted RBP19.13■□□□□ 0.65
DDX54-205ENST00000548786 LAMB1P07942 1786 aa19.13■□□□□ 0.65
DDX54-205ENST00000548786 FOCADQ5VW36 1801 aa19.13■□□□□ 0.65
DDX54-205ENST00000548786 COL2A1P02458 1487 aaPredicted RBP19.12■□□□□ 0.65
DDX54-205ENST00000548786 INHBEP58166 350 aa19.12■□□□□ 0.65
DDX54-205ENST00000548786 PPIL2Q13356 520 aa19.12■□□□□ 0.65
DDX54-205ENST00000548786 ANKRD45Q5TZF3 282 aa19.12■□□□□ 0.65
DDX54-205ENST00000548786 PICK1Q9NRD5 415 aa19.12■□□□□ 0.65
DDX54-205ENST00000548786 TCRBV5S4A2TA0A5A2 114 aa19.11■□□□□ 0.65
DDX54-205ENST00000548786 SNAPC2Q13487 334 aa19.11■□□□□ 0.65
DDX54-205ENST00000548786 NOL9Q5SY16 702 aaKnown RBP19.11■□□□□ 0.65
DDX54-205ENST00000548786 IFFO2Q5TF58 517 aa19.11■□□□□ 0.65
DDX54-205ENST00000548786 SCYL3Q8IZE3 742 aa19.11■□□□□ 0.65
DDX54-205ENST00000548786 ZNF296Q8WUU4 475 aaPredicted RBP19.11■□□□□ 0.65
DDX54-205ENST00000548786 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
DDX54-205ENST00000548786 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
DDX54-205ENST00000548786 DOCK1Q14185 1865 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 TESPA1A2RU30 521 aaPredicted RBP19.1■□□□□ 0.65
DDX54-205ENST00000548786 IGSF3O75054 1194 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 ALDH1A1P00352 501 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 PPATQ06203 517 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 CRHR2Q13324 411 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 OTUD7BQ6GQQ9 843 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 FAM43AQ8N2R8 423 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms