RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 BRCA2P51587 3418 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 TLR2O60603 784 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
COL2A1-209ENST00000546974 MAP4K4O95819 1239 aaPredicted RBP17.7■□□□□ 0.42
COL2A1-209ENST00000546974 LDHCP07864 332 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 MCAMP43121 646 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 PI16Q6UXB8 463 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 ITPRIPQ8IWB1 547 aa17.7■□□□□ 0.42
COL2A1-209ENST00000546974 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
COL2A1-209ENST00000546974 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
COL2A1-209ENST00000546974 PHF20L1A8MW92 1017 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 SURF6O75683 361 aaKnown RBP17.69■□□□□ 0.42
COL2A1-209ENST00000546974 RLBP1P12271 317 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 RHBDL3P58872 404 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 CAP1Q01518 475 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
COL2A1-209ENST00000546974 TNNI3KQ59H18 835 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 ANKRD23Q86SG2 305 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 ZSCAN29Q8IWY8 852 aaPredicted RBP17.69■□□□□ 0.42
COL2A1-209ENST00000546974 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.69■□□□□ 0.42
COL2A1-209ENST00000546974 C1orf115Q9H7X2 142 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
COL2A1-209ENST00000546974 FPGT-TNNI3KV9GXZ4 949 aa17.69■□□□□ 0.42
COL2A1-209ENST00000546974 MKI67P46013 3256 aaKnown RBP17.69■□□□□ 0.42
COL2A1-209ENST00000546974 KIAA0100Q14667 2235 aaKnown RBP17.68■□□□□ 0.42
COL2A1-209ENST00000546974 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
COL2A1-209ENST00000546974 PICALMQ13492 652 aa17.68■□□□□ 0.42
COL2A1-209ENST00000546974 CCDC158Q5M9N0 1113 aa17.68■□□□□ 0.42
COL2A1-209ENST00000546974 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
COL2A1-209ENST00000546974 CXCL11O14625 94 aa17.67■□□□□ 0.42
COL2A1-209ENST00000546974 TTC39AQ5SRH9 613 aa17.67■□□□□ 0.42
COL2A1-209ENST00000546974 SCYL3Q8IZE3 742 aa17.67■□□□□ 0.42
COL2A1-209ENST00000546974 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
COL2A1-209ENST00000546974 TBC1D12O60347 775 aa17.66■□□□□ 0.42
COL2A1-209ENST00000546974 MOGSQ13724 837 aa17.66■□□□□ 0.42
COL2A1-209ENST00000546974 ARMC5Q96C12 935 aa17.66■□□□□ 0.42
COL2A1-209ENST00000546974 ZNF512BQ96KM6 892 aaPredicted RBP17.66■□□□□ 0.42
COL2A1-209ENST00000546974 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
COL2A1-209ENST00000546974 PICK1Q9NRD5 415 aa17.66■□□□□ 0.42
COL2A1-209ENST00000546974 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 PDHXO00330 501 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 CTNND1O60716 968 aaKnown RBP17.65■□□□□ 0.42
COL2A1-209ENST00000546974 IGSF3O75054 1194 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 PTPRAP18433 802 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 KIF22Q14807 665 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 C17orf99Q6UX52 265 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 ZHX2Q9Y6X8 837 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 PHIPQ8WWQ0 1821 aa17.65■□□□□ 0.42
COL2A1-209ENST00000546974 MYO5AQ9Y4I1 1855 aaKnown RBP17.65■□□□□ 0.42
COL2A1-209ENST00000546974 PTPRFP10586 1907 aa17.64■□□□□ 0.42
COL2A1-209ENST00000546974 COL2A1P02458 1487 aaPredicted RBP17.64■□□□□ 0.41
COL2A1-209ENST00000546974 RBBP6Q7Z6E9 1792 aaKnown RBP17.64■□□□□ 0.41
COL2A1-209ENST00000546974 GNRH1P01148 92 aa17.64■□□□□ 0.41
COL2A1-209ENST00000546974 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.41
COL2A1-209ENST00000546974 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
COL2A1-209ENST00000546974 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
COL2A1-209ENST00000546974 AFG3L2Q9Y4W6 797 aa17.64■□□□□ 0.41
COL2A1-209ENST00000546974 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
COL2A1-209ENST00000546974 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 CYP2E1P05181 493 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
COL2A1-209ENST00000546974 MS4A1P11836 297 aa17.63■□□□□ 0.41
COL2A1-209ENST00000546974 NAA16Q6N069 864 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 GPAT2Q6NUI2 795 aa17.63■□□□□ 0.41
COL2A1-209ENST00000546974 FASTKD5Q7L8L6 764 aaKnown RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 NOL10Q9BSC4 688 aaKnown RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-209ENST00000546974 ADGRA2Q96PE1 1338 aa17.63■□□□□ 0.41
COL2A1-209ENST00000546974 ZSWIM8A7E2V4 1837 aa17.63■□□□□ 0.41
COL2A1-209ENST00000546974 BAG3O95817 575 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 PPP4CP60510 307 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 TEX11Q8IYF3 940 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 PARK7Q99497 189 aaKnown RBP17.62■□□□□ 0.41
COL2A1-209ENST00000546974 ARHGAP39Q9C0H5 1083 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL2A1-209ENST00000546974 CPA4Q9UI42 421 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
COL2A1-209ENST00000546974 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
COL2A1-209ENST00000546974 CDK5RAP2Q96SN8 1893 aa17.61■□□□□ 0.41
COL2A1-209ENST00000546974 POTEFA5A3E0 1075 aa17.61■□□□□ 0.41
COL2A1-209ENST00000546974 PLCG2P16885 1265 aa17.61■□□□□ 0.41
COL2A1-209ENST00000546974 PRMT2P55345 433 aa17.61■□□□□ 0.41
COL2A1-209ENST00000546974 SLC9C1Q4G0N8 1177 aa17.61■□□□□ 0.41
COL2A1-209ENST00000546974 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-209ENST00000546974 EAF2Q96CJ1 260 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-209ENST00000546974 ZNF333Q96JL9 665 aa17.61■□□□□ 0.41
COL2A1-209ENST00000546974 CCDC8Q9H0W5 538 aaPredicted RBP17.61■□□□□ 0.41
COL2A1-209ENST00000546974 ZAP70P43403 619 aa17.6■□□□□ 0.41
COL2A1-209ENST00000546974 ERC1Q8IUD2 1116 aa17.6■□□□□ 0.41
COL2A1-209ENST00000546974 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL2A1-209ENST00000546974 SLC45A1Q9Y2W3 748 aa17.6■□□□□ 0.41
COL2A1-209ENST00000546974 FOCADQ5VW36 1801 aa17.6■□□□□ 0.41
COL2A1-209ENST00000546974 ATAD5Q96QE3 1844 aa17.6■□□□□ 0.41
COL2A1-209ENST00000546974 BCRP11274 1271 aa17.59■□□□□ 0.41
COL2A1-209ENST00000546974 PSMC4P43686 418 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms