RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
SSH1-203ENST00000546433 TESK2Q96S53 571 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 ECE1P42892 770 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 RUFY3Q7L099 469 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 LMBR1Q8WVP7 490 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 FBLN1P23142 703 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 ACTN2P35609 894 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 IREB2P48200 963 aaKnown RBP11.79□□□□□ -0.52
SSH1-203ENST00000546433 NAPAP54920 295 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
SSH1-203ENST00000546433 HEATR3Q7Z4Q2 680 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 RASAL2Q9UJF2 1139 aa11.79□□□□□ -0.52
SSH1-203ENST00000546433 GIMAP7Q8NHV1 300 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 PKNOX2Q96KN3 472 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 TACC1O75410 805 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 IRX3P78415 501 aaPredicted RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 PRPF4BQ13523 1007 aaKnown RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 PLS1Q14651 629 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
SSH1-203ENST00000546433 MAATS1Q7Z4T9 603 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 FMNL3Q8IVF7 1028 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 HOXD10P28358 340 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 AFMP43652 599 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 BICD1Q96G01 975 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 POLR3GO15318 223 aaPredicted RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 PPP1R2P41236 205 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 ISM2Q6H9L7 571 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 AOPEPQ8N6M6 819 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 ARHGEF10LQ9HCE6 1279 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 IL13P35225 146 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 CLCN1P35523 988 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 AK2P54819 239 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
SSH1-203ENST00000546433 PLEKHM2Q8IWE5 1019 aa11.78□□□□□ -0.52
SSH1-203ENST00000546433 IQSEC2Q5JU85 1478 aa11.77□□□□□ -0.52
SSH1-203ENST00000546433 ASIC1P78348 528 aa11.77□□□□□ -0.52
SSH1-203ENST00000546433 SPATA31E1Q6ZUB1 1445 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 CHMLP26374 656 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 GNA11P29992 359 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 TMX1Q9H3N1 280 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 LIG1P18858 919 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 OSBPP22059 807 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 TYRO3Q06418 890 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 LRRC2Q9BYS8 371 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 DLC1Q96QB1 1528 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 PPRC1Q5VV67 1664 aaKnown RBP11.77□□□□□ -0.53
SSH1-203ENST00000546433 RNF187Q5TA31 235 aaPredicted RBP11.77□□□□□ -0.53
SSH1-203ENST00000546433 KRT79Q5XKE5 535 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 MROH2AA6NES4 1674 aa11.77□□□□□ -0.53
SSH1-203ENST00000546433 CCDC186Q7Z3E2 898 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 STMN4Q9H169 189 aaPredicted RBP11.76□□□□□ -0.53
SSH1-203ENST00000546433 HACL1Q9UJ83 578 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 MROH5Q6ZUA9 1318 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 LRRC45Q96CN5 670 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 KRT86O43790 486 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 TUBBP07437 444 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 SYT1P21579 422 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 RPS8P62241 208 aaKnown RBP11.76□□□□□ -0.53
SSH1-203ENST00000546433 KRT222Q8N1A0 295 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 TSNARE1Q96NA8 513 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
SSH1-203ENST00000546433 DNAJC25Q9H1X3 360 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 ARFGAP3Q9NP61 516 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 MYO3BQ8WXR4 1341 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 CLTCL1P53675 1640 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
SSH1-203ENST00000546433 PTPDC1A2A3K4 754 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 CTAGE9A4FU28 777 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 OPA1O60313 960 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 PA2G4Q9UQ80 394 aaKnown RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 IKBKGQ9Y6K9 419 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 A1BGP04217 495 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 TFCP2Q12800 502 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 CLEC4GQ6UXB4 293 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 NSRP1Q9H0G5 558 aaKnown RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 XDHP47989 1333 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 SLIT1O75093 1534 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 SREK1Q8WXA9 508 aaKnown RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 LPXNO60711 386 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 DHX58Q96C10 678 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 HOMER2Q9NSB8 354 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
SSH1-203ENST00000546433 PRR36Q9H6K5 1346 aa11.75□□□□□ -0.53
SSH1-203ENST00000546433 PUM3Q15397 648 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms