RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
YBX3-215ENST00000544504 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
YBX3-215ENST00000544504 FAM227BQ96M60 508 aa11.39□□□□□ -0.59
YBX3-215ENST00000544504 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
YBX3-215ENST00000544504 A0A0D9SFI3 127 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 TCRBV5S4A2TA0A5A2 114 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 BAG3O95817 575 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 HDLBPQ00341 1268 aaKnown RBP11.38□□□□□ -0.59
YBX3-215ENST00000544504 MECOMQ03112 1051 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 SREBF2Q12772 1141 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 ANGEL2Q5VTE6 544 aaKnown RBP11.38□□□□□ -0.59
YBX3-215ENST00000544504 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 NSUN4Q96CB9 384 aaKnown RBP11.38□□□□□ -0.59
YBX3-215ENST00000544504 PAPPA2Q9BXP8 1791 aa11.38□□□□□ -0.59
YBX3-215ENST00000544504 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
YBX3-215ENST00000544504 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 VIL1P09327 827 aaKnown RBP11.37□□□□□ -0.59
YBX3-215ENST00000544504 PLCG2P16885 1265 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 PRDX5P30044 214 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 ZNF280AP59817 542 aaPredicted RBP11.37□□□□□ -0.59
YBX3-215ENST00000544504 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 OSBP2Q969R2 916 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
YBX3-215ENST00000544504 DSCC1Q9BVC3 393 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 C22orf23Q9BZE7 217 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 KCNQ5Q9NR82 932 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
YBX3-215ENST00000544504 COL6A3P12111 3177 aa11.37□□□□□ -0.59
YBX3-215ENST00000544504 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 UBE2Q2LH0YL09 131 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 GPAA1O43292 621 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 SEC24BO95487 1268 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 TBC1D32Q96NH3 1257 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 USP26Q9BXU7 913 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 NACAP1Q9BZK3 213 aa11.36□□□□□ -0.59
YBX3-215ENST00000544504 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
YBX3-215ENST00000544504 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 PSME4Q14997 1843 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 ZKSCAN1P17029 563 aaPredicted RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 RBM25P49756 843 aaKnown RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 ANAPC15P60006 121 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 RSBN1LQ6PCB5 846 aaPredicted RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 OGFOD1Q8N543 542 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 TEKT1Q969V4 418 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 CRNKL1Q9BZJ0 848 aaKnown RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 LSG1Q9H089 658 aaKnown RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
YBX3-215ENST00000544504 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
YBX3-215ENST00000544504 MYO5AQ9Y4I1 1855 aaKnown RBP11.34□□□□□ -0.59
YBX3-215ENST00000544504 M0R2C6 588 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 MBD4O95243 580 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 PPP4CP60510 307 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
YBX3-215ENST00000544504 ALX1Q15699 326 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 OTOP1Q7RTM1 612 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
YBX3-215ENST00000544504 STRBPQ96SI9 672 aaKnown RBP11.34□□□□□ -0.59
YBX3-215ENST00000544504 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
YBX3-215ENST00000544504 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 MYOZ2Q9NPC6 264 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 SERPINA10Q9UK55 444 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 GAKO14976 1311 aa11.34□□□□□ -0.59
YBX3-215ENST00000544504 GPR75-ASB3A0A0A6YYF3 556 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 PATL2C9JE40 543 aaKnown RBP11.33□□□□□ -0.6
YBX3-215ENST00000544504 DLL1O00548 723 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
YBX3-215ENST00000544504 HSPA4P34932 840 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 NF2P35240 595 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
YBX3-215ENST00000544504 CCDC129Q6ZRS4 1044 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 RIOK1Q9BRS2 568 aaKnown RBP11.33□□□□□ -0.6
YBX3-215ENST00000544504 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 ATP8A2Q9NTI2 1148 aa11.33□□□□□ -0.6
YBX3-215ENST00000544504 APPP05067 770 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 EN2P19622 333 aaPredicted RBP11.32□□□□□ -0.6
YBX3-215ENST00000544504 INHBEP58166 350 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 PTH1RQ03431 593 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 KRT32Q14532 448 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
YBX3-215ENST00000544504 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 MIGA1Q8NAN2 632 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 ZNF384Q8TF68 577 aa11.32□□□□□ -0.6
YBX3-215ENST00000544504 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms