RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 NACAP1Q9BZK3 213 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 KRT23Q9C075 422 aa14.2□□□□□ -0.14
LRTOMT-221ENST00000544409 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 CDC27P30260 824 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 LIFRP42702 1097 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 BCAMP50895 628 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 CTDSPL2Q05D32 466 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 NAT10Q9H0A0 1025 aaKnown RBP14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 CLIP2Q9UDT6 1046 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 IFIT3O14879 490 aaKnown RBP14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 IARSP41252 1262 aaKnown RBP14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 TERF2Q15554 542 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 AKNAD1Q5T1N1 836 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 KRT40Q6A162 431 aa14.19□□□□□ -0.14
LRTOMT-221ENST00000544409 CCDC69A6NI79 296 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 GSG1L2A8MUP6 293 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 CHRNDQ07001 517 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 TRIM29Q14134 588 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 MFSD6Q6ZSS7 791 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 SLC12A7Q9Y666 1083 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 PNPLA7Q6ZV29 1317 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 TDO2P48775 406 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 ZRSR1Q15695 479 aaKnown RBP14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 CCDC144CPQ8IYA2 1237 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 SMARCC1Q92922 1105 aaPredicted RBP14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 PHKBQ93100 1093 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 AIFM3Q96NN9 605 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 ZSWIM5Q9P217 1185 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 SLC4A4Q9Y6R1 1079 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 LCORLQ8N3X6 602 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 LRP2BPQ9P2M1 347 aa14.18□□□□□ -0.14
LRTOMT-221ENST00000544409 BCORQ6W2J9 1755 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 SLC39A14Q15043 492 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 NTRK3Q16288 839 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 DHX40Q8IX18 779 aaKnown RBP14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 MRFAP1L1Q96HT8 127 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 NRBP1Q9UHY1 535 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 STK36Q9NRP7 1315 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 CAPN2P17655 700 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 CMA1P23946 247 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 KIAA1468Q9P260 1216 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 SPATA31A5Q5VU36 1347 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 SPATA31A7Q8IWB4 1347 aa14.17□□□□□ -0.14
LRTOMT-221ENST00000544409 PRKAB2O43741 272 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 SART3Q15020 963 aaKnown RBP14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 JMYQ8N9B5 988 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 MYL10Q9BUA6 226 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 AXDND1Q5T1B0 1012 aaPredicted RBP14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 WASF1Q92558 559 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 ERCC4Q92889 916 aaPredicted RBP14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 FAM217BQ9NTX9 383 aaPredicted RBP14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 A0A087WWV3 80 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 RANBP6O60518 1105 aaKnown RBP14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 ZNF202O95125 648 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 SLC26A6Q9BXS9 759 aa14.16□□□□□ -0.14
LRTOMT-221ENST00000544409 NID2Q14112 1375 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 COL5A3P25940 1745 aaPredicted RBP14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 PPP6R2O75170 966 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 SLC3A2P08195 630 aaKnown RBP14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 PFKFB1P16118 471 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 AOPEPQ8N6M6 819 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 ZBTB9Q96C00 473 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 RNF41Q9H4P4 317 aaPredicted RBP14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 ERICH2A1L162 156 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 FMNL1O95466 1100 aaPredicted RBP14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 WTAPQ15007 396 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 MIGA1Q8NAN2 632 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 MTA3Q9BTC8 594 aa14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
LRTOMT-221ENST00000544409 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.15
LRTOMT-221ENST00000544409 CYP7A1P22680 504 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 MARCKSP29966 332 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 LRMPQ12912 555 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 ANKRD18AQ8IVF6 992 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 FBXW7Q969H0 707 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 C16orf45Q96MC5 204 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 WDHD1O75717 1129 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 IFNAR1P17181 557 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 BPIFA3Q9BQP9 254 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 A0A1B0GUL6 1792 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 IRX3P78415 501 aaPredicted RBP14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 TMTC2Q8N394 836 aa14.14□□□□□ -0.15
LRTOMT-221ENST00000544409 KIF18AQ8NI77 898 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms