RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 SKAP1Q86WV1 359 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 CERS3Q8IU89 383 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 LCORLQ8N3X6 602 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 MIGA1Q8NAN2 632 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 EVI5LQ96CN4 794 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 OSBPL5Q9H0X9 879 aaPredicted RBP12□□□□□ -0.49
VEGFB-204ENST00000543462 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 TMOD2Q9NZR1 351 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 RNF113AO15541 343 aaKnown RBP11.99□□□□□ -0.49
VEGFB-204ENST00000543462 BAG3O95817 575 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 ZFYP08048 801 aaPredicted RBP11.99□□□□□ -0.49
VEGFB-204ENST00000543462 TNNI2P48788 182 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 HTRA3P83110 453 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 METTL16Q86W50 562 aaKnown RBP11.99□□□□□ -0.49
VEGFB-204ENST00000543462 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 APPBP2Q92624 585 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 OSBP2Q969R2 916 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
VEGFB-204ENST00000543462 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
VEGFB-204ENST00000543462 GBA2Q9HCG7 927 aaPredicted RBP11.99□□□□□ -0.49
VEGFB-204ENST00000543462 LOC285556D6RIA3 1793 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 DDTLA6NHG4 134 aaPredicted RBP11.98□□□□□ -0.49
VEGFB-204ENST00000543462 FOXP2O15409 715 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 MBD4O95243 580 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 ZSCAN25Q6NSZ9 544 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 DNAJC5GQ8N7S2 189 aa11.98□□□□□ -0.49
VEGFB-204ENST00000543462 M0R2C6 588 aa11.97□□□□□ -0.49
VEGFB-204ENST00000543462 TCP10Q12799 353 aa11.97□□□□□ -0.49
VEGFB-204ENST00000543462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
VEGFB-204ENST00000543462 STRBPQ96SI9 672 aaKnown RBP11.97□□□□□ -0.49
VEGFB-204ENST00000543462 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
VEGFB-204ENST00000543462 ARMT1Q9H993 441 aa11.97□□□□□ -0.49
VEGFB-204ENST00000543462 ZNF112Q9UJU3 913 aa11.97□□□□□ -0.49
VEGFB-204ENST00000543462 FZD1Q9UP38 647 aa11.97□□□□□ -0.49
VEGFB-204ENST00000543462 A0A0D9SFI3 127 aa11.96□□□□□ -0.49
VEGFB-204ENST00000543462 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
VEGFB-204ENST00000543462 PICALMQ13492 652 aa11.96□□□□□ -0.49
VEGFB-204ENST00000543462 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
VEGFB-204ENST00000543462 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
VEGFB-204ENST00000543462 SEC62Q99442 399 aaKnown RBP11.96□□□□□ -0.49
VEGFB-204ENST00000543462 NOL10Q9BSC4 688 aaKnown RBP11.96□□□□□ -0.49
VEGFB-204ENST00000543462 DNAJC18Q9H819 358 aa11.96□□□□□ -0.49
VEGFB-204ENST00000543462 ZNF408Q9H9D4 720 aa11.96□□□□□ -0.49
VEGFB-204ENST00000543462 EPB41L4AQ9HCS5 686 aaPredicted RBP11.96□□□□□ -0.49
VEGFB-204ENST00000543462 DCP1AQ9NPI6 582 aaPredicted RBP11.96□□□□□ -0.49
VEGFB-204ENST00000543462 ROBO3Q96MS0 1386 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 UNCXA6NJT0 531 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 PHF20L1A8MW92 1017 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
VEGFB-204ENST00000543462 GPAA1O43292 621 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 PRKAB2O43741 272 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 TBC1D12O60347 775 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 SLURP2P0DP57 97 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 SDSP20132 328 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.95□□□□□ -0.5
VEGFB-204ENST00000543462 MAPKAPK5Q8IW41 473 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 KLRG1Q96E93 195 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 FAM227BQ96M60 508 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 CSRNP1Q96S65 589 aa11.95□□□□□ -0.5
VEGFB-204ENST00000543462 CRNKL1Q9BZJ0 848 aaKnown RBP11.95□□□□□ -0.5
VEGFB-204ENST00000543462 PCNTO95613 3336 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 GSG1L2A8MUP6 293 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 NF2P35240 595 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 HUNKP57058 714 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 EVX2Q03828 476 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 GABPAQ06546 454 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
VEGFB-204ENST00000543462 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 C2orf69Q8N8R5 385 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 EHD4Q9H223 541 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 IL25Q9H293 177 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
VEGFB-204ENST00000543462 ATP8A2Q9NTI2 1148 aa11.94□□□□□ -0.5
VEGFB-204ENST00000543462 PARP14Q460N5 1801 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 SLC10A3P09131 477 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 NMIQ13287 307 aaPredicted RBP11.93□□□□□ -0.5
VEGFB-204ENST00000543462 RRP1BQ14684 758 aaKnown RBP11.93□□□□□ -0.5
VEGFB-204ENST00000543462 BMP2KLQ5H9B9 411 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 NOL9Q5SY16 702 aaKnown RBP11.93□□□□□ -0.5
VEGFB-204ENST00000543462 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
VEGFB-204ENST00000543462 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 HOOK2Q96ED9 719 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 CLMNQ96JQ2 1002 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 HELLSQ9NRZ9 838 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 PALD1Q9ULE6 856 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 ANGEL1Q9UNK9 670 aaKnown RBP11.93□□□□□ -0.5
VEGFB-204ENST00000543462 SNCAIPQ9Y6H5 919 aa11.93□□□□□ -0.5
VEGFB-204ENST00000543462 ZMYM6O95789 1325 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 SMIM22K7EJ46 135 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
VEGFB-204ENST00000543462 GJA5P36382 358 aa11.92□□□□□ -0.5
VEGFB-204ENST00000543462 VGLL4Q14135 290 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms