RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ZFPM1Q8IX07 1006 aa19.77■□□□□ 0.76
CIT-212ENST00000543239 WRNIP1Q96S55 665 aa19.77■□□□□ 0.76
CIT-212ENST00000543239 DNAJC2Q99543 621 aaKnown RBP19.77■□□□□ 0.76
CIT-212ENST00000543239 AATFQ9NY61 560 aaKnown RBP eCLIP19.77■□□□□ 0.76
CIT-212ENST00000543239 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
CIT-212ENST00000543239 ATRNL1Q5VV63 1379 aa19.77■□□□□ 0.76
CIT-212ENST00000543239 CYP7A1P22680 504 aa19.76■□□□□ 0.75
CIT-212ENST00000543239 TM4SF4P48230 202 aa19.76■□□□□ 0.75
CIT-212ENST00000543239 HDAC1Q13547 482 aaPredicted RBP19.76■□□□□ 0.75
CIT-212ENST00000543239 ZSCAN29Q8IWY8 852 aaPredicted RBP19.76■□□□□ 0.75
CIT-212ENST00000543239 TEX11Q8IYF3 940 aa19.76■□□□□ 0.75
CIT-212ENST00000543239 MAGEB6Q8N7X4 407 aa19.76■□□□□ 0.75
CIT-212ENST00000543239 SH3RF3Q8TEJ3 882 aaPredicted RBP19.76■□□□□ 0.75
CIT-212ENST00000543239 MANSC4A6NHS7 340 aaPredicted RBP19.75■□□□□ 0.75
CIT-212ENST00000543239 GOLIM4O00461 696 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 LBX1P52954 281 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 MKRN3Q13064 507 aaKnown RBP19.75■□□□□ 0.75
CIT-212ENST00000543239 MIGA2Q7L4E1 593 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 SH3BP5LQ7L8J4 393 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 GPATCH3Q96I76 525 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 HAUS7Q99871 368 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 BOLA2Q9H3K6 86 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 ELP3Q9H9T3 547 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 ECHDC1Q9NTX5 307 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 PAG1Q9NWQ8 432 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 ZNF112Q9UJU3 913 aa19.75■□□□□ 0.75
CIT-212ENST00000543239 AK9Q5TCS8 1911 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 DDTLA6NHG4 134 aaPredicted RBP19.74■□□□□ 0.75
CIT-212ENST00000543239 INHBEP58166 350 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 MAP3K10Q02779 954 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 GCC1Q96CN9 775 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
CIT-212ENST00000543239 RNF186Q9NXI6 227 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
CIT-212ENST00000543239 SPDYE5A6NIY4 337 aa19.73■□□□□ 0.75
CIT-212ENST00000543239 COL13A1Q5TAT6 717 aaPredicted RBP19.73■□□□□ 0.75
CIT-212ENST00000543239 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.73■□□□□ 0.75
CIT-212ENST00000543239 GJA5P36382 358 aa19.72■□□□□ 0.75
CIT-212ENST00000543239 NOL9Q5SY16 702 aaKnown RBP19.72■□□□□ 0.75
CIT-212ENST00000543239 SLC9C2Q5TAH2 1124 aa19.72■□□□□ 0.75
CIT-212ENST00000543239 ERO1BQ86YB8 467 aa19.72■□□□□ 0.75
CIT-212ENST00000543239 EXOC6Q8TAG9 804 aa19.72■□□□□ 0.75
CIT-212ENST00000543239 ZKSCAN4Q969J2 545 aaPredicted RBP19.72■□□□□ 0.75
CIT-212ENST00000543239 DHX36Q9H2U1 1008 aaKnown RBP19.72■□□□□ 0.75
CIT-212ENST00000543239 TSKSQ9UJT2 592 aa19.72■□□□□ 0.75
CIT-212ENST00000543239 FOCADQ5VW36 1801 aa19.72■□□□□ 0.75
CIT-212ENST00000543239 TBC1D12O60347 775 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 TRPA1O75762 1119 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 PDE6AP16499 860 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 INPP5BP32019 993 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 TGFBRAP1Q8WUH2 860 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 EDC3Q96F86 508 aaKnown RBP19.71■□□□□ 0.75
CIT-212ENST00000543239 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.71■□□□□ 0.75
CIT-212ENST00000543239 ZBTB47Q9UFB7 747 aaPredicted RBP19.71■□□□□ 0.75
CIT-212ENST00000543239 FLT1P17948 1338 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 TTC41PQ6P2S7 1318 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 CDK5RAP2Q96SN8 1893 aa19.71■□□□□ 0.75
CIT-212ENST00000543239 ALDH1A1P00352 501 aa19.7■□□□□ 0.74
CIT-212ENST00000543239 DYNLL1P63167 89 aaKnown RBP19.7■□□□□ 0.74
CIT-212ENST00000543239 OTUD5Q96G74 571 aa19.7■□□□□ 0.74
CIT-212ENST00000543239 TCRBV5S4A2TA0A5A2 114 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 TESPA1A2RU30 521 aaPredicted RBP19.69■□□□□ 0.74
CIT-212ENST00000543239 PHF20L1A8MW92 1017 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 GTF2A2P52657 109 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 PPATQ06203 517 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 MAPKAPK5Q8IW41 473 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 RIOK1Q9BRS2 568 aaKnown RBP19.69■□□□□ 0.74
CIT-212ENST00000543239 CFHR5Q9BXR6 569 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
CIT-212ENST00000543239 ZNF532Q9HCE3 1301 aa19.69■□□□□ 0.74
CIT-212ENST00000543239 ERC2O15083 957 aa19.68■□□□□ 0.74
CIT-212ENST00000543239 ADD2P35612 726 aa19.68■□□□□ 0.74
CIT-212ENST00000543239 PPIL2Q13356 520 aa19.68■□□□□ 0.74
CIT-212ENST00000543239 IFNL1Q8IU54 200 aa19.68■□□□□ 0.74
CIT-212ENST00000543239 MS4A4AQ96JQ5 239 aa19.68■□□□□ 0.74
CIT-212ENST00000543239 PI4KBQ9UBF8 816 aa19.68■□□□□ 0.74
CIT-212ENST00000543239 HERC5Q9UII4 1024 aaKnown RBP19.68■□□□□ 0.74
CIT-212ENST00000543239 MAGEB6P1A0A0J9YX57 407 aa19.67■□□□□ 0.74
CIT-212ENST00000543239 CTNND1O60716 968 aaKnown RBP19.67■□□□□ 0.74
CIT-212ENST00000543239 ANKRD45Q5TZF3 282 aa19.67■□□□□ 0.74
CIT-212ENST00000543239 OTUD7BQ6GQQ9 843 aa19.67■□□□□ 0.74
CIT-212ENST00000543239 ZSCAN25Q6NSZ9 544 aa19.67■□□□□ 0.74
CIT-212ENST00000543239 SCYL3Q8IZE3 742 aa19.67■□□□□ 0.74
CIT-212ENST00000543239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.74
CIT-212ENST00000543239 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
CIT-212ENST00000543239 IRF6O14896 467 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 MX1P20591 662 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 USP5P45974 858 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 UBE3CQ15386 1083 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 TSHZ3Q63HK5 1081 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 SALL3Q9BXA9 1300 aa19.66■□□□□ 0.74
CIT-212ENST00000543239 MYH7P12883 1935 aa19.65■□□□□ 0.74
CIT-212ENST00000543239 GLRX3O76003 335 aaKnown RBP19.65■□□□□ 0.74
CIT-212ENST00000543239 SNAPC2Q13487 334 aa19.65■□□□□ 0.74
CIT-212ENST00000543239 NOM1Q5C9Z4 860 aaKnown RBP19.65■□□□□ 0.74
CIT-212ENST00000543239 METTL16Q86W50 562 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms