RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
LRP6-206ENST00000543091 SNAP23O00161 211 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 SLC27A2O14975 620 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 KINO60870 393 aaKnown RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 RPS12P25398 132 aaKnown RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 CALML3P27482 149 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 MCAMP43121 646 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 DIXDC1Q155Q3 683 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 TMEM266Q2M3C6 531 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 SDR42E1Q8WUS8 393 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 TCEANC2Q96MN5 208 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 NHSL1Q5SYE7 1610 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 COL16A1Q07092 1604 aaPredicted RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 BECN2A8MW95 431 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 TBC1D10BQ4KMP7 808 aaPredicted RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 SERPINB13Q9UIV8 391 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
LRP6-206ENST00000543091 IVNS1ABPQ9Y6Y0 642 aa9.01□□□□□ -0.97
LRP6-206ENST00000543091 PHRF1Q9P1Y6 1649 aaKnown RBP9□□□□□ -0.97
LRP6-206ENST00000543091 A0A0D9SFI3 127 aa9□□□□□ -0.97
LRP6-206ENST00000543091 ME1P48163 572 aa9□□□□□ -0.97
LRP6-206ENST00000543091 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
LRP6-206ENST00000543091 RAB11FIP4Q86YS3 637 aa9□□□□□ -0.97
LRP6-206ENST00000543091 SMARCC2Q8TAQ2 1214 aa9□□□□□ -0.97
LRP6-206ENST00000543091 USP26Q9BXU7 913 aa9□□□□□ -0.97
LRP6-206ENST00000543091 C6orf50Q9HD87 102 aa9□□□□□ -0.97
LRP6-206ENST00000543091 PNMA2Q9UL42 364 aa9□□□□□ -0.97
LRP6-206ENST00000543091 FIBPO43427 364 aa9□□□□□ -0.97
LRP6-206ENST00000543091 ZBED4O75132 1171 aa9□□□□□ -0.97
LRP6-206ENST00000543091 HSPD1P10809 573 aaKnown RBP9□□□□□ -0.97
LRP6-206ENST00000543091 NAPAP54920 295 aa9□□□□□ -0.97
LRP6-206ENST00000543091 TMEM132AQ24JP5 1023 aa9□□□□□ -0.97
LRP6-206ENST00000543091 RUFY3Q7L099 469 aa9□□□□□ -0.97
LRP6-206ENST00000543091 CHURC1Q8WUH1 139 aa9□□□□□ -0.97
LRP6-206ENST00000543091 LZTS2Q9BRK4 669 aa9□□□□□ -0.97
LRP6-206ENST00000543091 LRP6O75581 1613 aa9□□□□□ -0.97
LRP6-206ENST00000543091 PEAK1Q9H792 1746 aa9□□□□□ -0.97
LRP6-206ENST00000543091 CEBPZQ03701 1054 aaKnown RBP9□□□□□ -0.97
LRP6-206ENST00000543091 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
LRP6-206ENST00000543091 ABCB5Q2M3G0 1257 aa9□□□□□ -0.97
LRP6-206ENST00000543091 WWC2Q6AWC2 1192 aa9□□□□□ -0.97
LRP6-206ENST00000543091 HEATR3Q7Z4Q2 680 aa9□□□□□ -0.97
LRP6-206ENST00000543091 SMCR8Q8TEV9 937 aaPredicted RBP9□□□□□ -0.97
LRP6-206ENST00000543091 GZF1Q9H116 711 aaPredicted RBP9□□□□□ -0.97
LRP6-206ENST00000543091 GLT8D2Q9H1C3 349 aa9□□□□□ -0.97
LRP6-206ENST00000543091 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
LRP6-206ENST00000543091 GNA11P29992 359 aa9□□□□□ -0.97
LRP6-206ENST00000543091 HOXA10P31260 410 aaPredicted RBP9□□□□□ -0.97
LRP6-206ENST00000543091 C2orf69Q8N8R5 385 aa9□□□□□ -0.97
LRP6-206ENST00000543091 PIH1D3Q9NQM4 214 aaKnown RBP9□□□□□ -0.97
LRP6-206ENST00000543091 GOLGA6L19H0YKK7 550 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 MBD3O95983 291 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 MMP14P50281 582 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ZYXQ15942 572 aaKnown RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 ZKSCAN3Q9BRR0 538 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 VPS33BQ9H267 617 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 HACL1Q9UJ83 578 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ARID4AP29374 1257 aaPredicted RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 PRDX5P30044 214 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ICA1Q05084 483 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ALS2Q96Q42 1657 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 RBM25P49756 843 aaKnown RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 KIF4BQ2VIQ3 1234 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 CHST3Q7LGC8 479 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ALG1Q9BT22 464 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 MRC1P22897 1456 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 PES1O00541 588 aaKnown RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 TM4SF1P30408 202 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 DYNLL1P63167 89 aaKnown RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 KIAA2012Q0VF49 1180 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 ARHGEF6Q15052 776 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 CLIP2Q9UDT6 1046 aa8.99□□□□□ -0.97
LRP6-206ENST00000543091 CNOT7Q9UIV1 285 aaKnown RBP8.99□□□□□ -0.97
LRP6-206ENST00000543091 MROH7-TTC4A0A0A0MT08 1334 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 FGAP02671 866 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 GSPT1P15170 499 aaKnown RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 RPS6KB1P23443 525 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 RSBN1LQ6PCB5 846 aaPredicted RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 SASS6Q6UVJ0 657 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 AGBL3Q8NEM8 1001 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 SPATA32Q96LK8 384 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 SEC62Q99442 399 aaKnown RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 USP14P54578 494 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 ABT1Q9ULW3 272 aaKnown RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 BMP15O95972 392 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 APOBRQ0VD83 1088 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 PNMA8AQ86V59 439 aaPredicted RBP8.98□□□□□ -0.97
LRP6-206ENST00000543091 MICALL2Q8IY33 904 aa8.98□□□□□ -0.97
LRP6-206ENST00000543091 TM6SF1Q9BZW5 370 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms