RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 SRGAP3O43295 1099 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 CTGFP29279 349 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 UBXN2AP68543 259 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 CHAF1AQ13111 956 aaPredicted RBP14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 GRIK5Q16478 980 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 FKBP1CQ5VVH2 108 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 ANKRD23Q86SG2 305 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 KAZALD1Q96I82 304 aa14.15□□□□□ -0.14
SRGAP1-205ENST00000542841 MYPNQ86TC9 1320 aa14.15□□□□□ -0.15
SRGAP1-205ENST00000542841 CAVIN4Q5BKX8 364 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 FBXO33Q7Z6M2 555 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 ZDHHC15Q96MV8 337 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 MRIQ9BWK5 157 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 ZNF341Q9BYN7 854 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 PRO3102Q9H379 93 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 BICC1Q9H694 974 aaKnown RBP14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 IQSEC3Q9UPP2 1182 aaPredicted RBP14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 MAST3O60307 1309 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
SRGAP1-205ENST00000542841 A0A1W2PPC1 479 aa14.13□□□□□ -0.15
SRGAP1-205ENST00000542841 RGS3P49796 1198 aa14.13□□□□□ -0.15
SRGAP1-205ENST00000542841 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
SRGAP1-205ENST00000542841 ERC1Q8IUD2 1116 aa14.13□□□□□ -0.15
SRGAP1-205ENST00000542841 U2AF1L4Q8WU68 220 aaKnown RBP14.13□□□□□ -0.15
SRGAP1-205ENST00000542841 PUS3Q9BZE2 481 aaKnown RBP14.13□□□□□ -0.15
SRGAP1-205ENST00000542841 RPAP1Q9BWH6 1393 aaPredicted RBP14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 FARP2O94887 1054 aaPredicted RBP14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 INPP5BP32019 993 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 FCGRTP55899 365 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 APOBEC3HQ6NTF7 200 aaKnown RBP14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 SLAIN1Q8ND83 568 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 PARK7Q99497 189 aaKnown RBP14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 LRRCC1Q9C099 1032 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 KCNH4Q9UQ05 1017 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 SUGT1Q9Y2Z0 365 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 ADGRA2Q96PE1 1338 aa14.12□□□□□ -0.15
SRGAP1-205ENST00000542841 EVI5O60447 810 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 SURF6O75683 361 aaKnown RBP14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 PRKCZQ05513 592 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 HHIPL2Q6UWX4 724 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 KIF1BPQ96EK5 621 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 LNPKQ9C0E8 428 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 COPRSQ9NQ92 184 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 FBXO3Q9UK99 471 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 LAMA3Q16787 3333 aa14.11□□□□□ -0.15
SRGAP1-205ENST00000542841 SGPL1O95470 568 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 PDE4AP27815 886 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 METTL24Q5JXM2 366 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 UNC93B1Q9H1C4 597 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 EXOC6BQ9Y2D4 811 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 COL6A3P12111 3177 aa14.1□□□□□ -0.15
SRGAP1-205ENST00000542841 BCRP11274 1271 aa14.09□□□□□ -0.15
SRGAP1-205ENST00000542841 CAPN2P17655 700 aa14.09□□□□□ -0.15
SRGAP1-205ENST00000542841 BCAMP50895 628 aa14.09□□□□□ -0.15
SRGAP1-205ENST00000542841 MOGSQ13724 837 aa14.09□□□□□ -0.15
SRGAP1-205ENST00000542841 ZNF112Q9UJU3 913 aa14.09□□□□□ -0.15
SRGAP1-205ENST00000542841 ADCY3O60266 1144 aa14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 PDE8BO95263 885 aa14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 TFRCP02786 760 aaKnown RBP14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 CYP2C8P10632 490 aa14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 G3BP1Q13283 466 aaKnown RBP eCLIP14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 NOL9Q5SY16 702 aaKnown RBP14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 OSBPL3Q9H4L5 887 aa14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 GABRQQ9UN88 632 aa14.08□□□□□ -0.16
SRGAP1-205ENST00000542841 SOX1O00570 391 aaPredicted RBP14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 CXCL11O14625 94 aa14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 TCP10Q12799 353 aa14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 OS9Q13438 667 aaPredicted RBP14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 LRRC24Q50LG9 513 aa14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 BMP2KLQ5H9B9 411 aa14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 LRCH3Q96II8 777 aa14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 STAP2Q9UGK3 403 aa14.07□□□□□ -0.16
SRGAP1-205ENST00000542841 INHAP05111 366 aa14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 IFIT1P09914 478 aaKnown RBP14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 FLT3LGP49771 235 aa14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 GPAT2Q6NUI2 795 aa14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 PXYLP1Q8TE99 480 aa14.06□□□□□ -0.16
SRGAP1-205ENST00000542841 TNPO2O14787 897 aaKnown RBP14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 CIAO1O76071 339 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 ELNP15502 786 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 PUM3Q15397 648 aaKnown RBP14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 CDC42EP5Q6NZY7 148 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 PLEKHM2Q8IWE5 1019 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 CLASRPQ8N2M8 674 aaKnown RBP14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 WDR66Q8TBY9 1149 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 DEFB118Q96PH6 123 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 SALL3Q9BXA9 1300 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 A0A0C4DFX4 3053 aa14.05□□□□□ -0.16
SRGAP1-205ENST00000542841 A0A0G2JLL6 359 aaPredicted RBP14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 EIF5BO60841 1220 aaKnown RBP14.04□□□□□ -0.16
SRGAP1-205ENST00000542841 NFIAQ12857 509 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms