RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 AATFQ9NY61 560 aaKnown RBP eCLIP24.43■■□□□ 1.5
CACNA2D4-215ENST00000542340 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.43■■□□□ 1.5
CACNA2D4-215ENST00000542340 CSADQ9Y600 493 aa24.43■■□□□ 1.5
CACNA2D4-215ENST00000542340 SREBF2Q12772 1141 aa24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 COL13A1Q5TAT6 717 aaPredicted RBP24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 ZSCAN29Q8IWY8 852 aaPredicted RBP24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 TEX11Q8IYF3 940 aa24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 SH3RF3Q8TEJ3 882 aaPredicted RBP24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 WRNIP1Q96S55 665 aa24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 DNAJC2Q99543 621 aaKnown RBP24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 BOLA2Q9H3K6 86 aa24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 ELP3Q9H9T3 547 aa24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 ZNF112Q9UJU3 913 aa24.42■■□□□ 1.5
CACNA2D4-215ENST00000542340 GOLIM4O00461 696 aa24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 INHBEP58166 350 aa24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 HDAC1Q13547 482 aaPredicted RBP24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 MAGEB6Q8N7X4 407 aa24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 HAUS7Q99871 368 aa24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 RNF186Q9NXI6 227 aa24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 MYO5AQ9Y4I1 1855 aaKnown RBP24.41■■□□□ 1.5
CACNA2D4-215ENST00000542340 DDTLA6NHG4 134 aaPredicted RBP24.4■■□□□ 1.5
CACNA2D4-215ENST00000542340 MANSC4A6NHS7 340 aaPredicted RBP24.4■■□□□ 1.5
CACNA2D4-215ENST00000542340 MAP3K10Q02779 954 aa24.4■■□□□ 1.5
CACNA2D4-215ENST00000542340 CERS3Q8IU89 383 aa24.4■■□□□ 1.5
CACNA2D4-215ENST00000542340 ECHDC1Q9NTX5 307 aa24.4■■□□□ 1.5
CACNA2D4-215ENST00000542340 ATRNL1Q5VV63 1379 aa24.4■■□□□ 1.5
CACNA2D4-215ENST00000542340 TRPA1O75762 1119 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 GJA5P36382 358 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 ZKSCAN4Q969J2 545 aaPredicted RBP24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 OPTNQ96CV9 577 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 OSBPL5Q9H0X9 879 aaPredicted RBP24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 PAG1Q9NWQ8 432 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 TSKSQ9UJT2 592 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 SNCAIPQ9Y6H5 919 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 OTOFQ9HC10 1997 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 AK9Q5TCS8 1911 aa24.39■■□□□ 1.49
CACNA2D4-215ENST00000542340 COL2A1P02458 1487 aaPredicted RBP24.38■■□□□ 1.49
CACNA2D4-215ENST00000542340 SLC9C2Q5TAH2 1124 aa24.38■■□□□ 1.49
CACNA2D4-215ENST00000542340 EXOC6Q8TAG9 804 aa24.38■■□□□ 1.49
CACNA2D4-215ENST00000542340 GPATCH3Q96I76 525 aa24.38■■□□□ 1.49
CACNA2D4-215ENST00000542340 DOCK2Q92608 1830 aa24.38■■□□□ 1.49
CACNA2D4-215ENST00000542340 SPDYE5A6NIY4 337 aa24.37■■□□□ 1.49
CACNA2D4-215ENST00000542340 INPP5BP32019 993 aa24.37■■□□□ 1.49
CACNA2D4-215ENST00000542340 ERO1BQ86YB8 467 aa24.37■■□□□ 1.49
CACNA2D4-215ENST00000542340 GCC1Q96CN9 775 aa24.37■■□□□ 1.49
CACNA2D4-215ENST00000542340 EDC3Q96F86 508 aaKnown RBP24.37■■□□□ 1.49
CACNA2D4-215ENST00000542340 TBC1D12O60347 775 aa24.36■■□□□ 1.49
CACNA2D4-215ENST00000542340 PDE6AP16499 860 aa24.36■■□□□ 1.49
CACNA2D4-215ENST00000542340 DYNLL1P63167 89 aaKnown RBP24.36■■□□□ 1.49
CACNA2D4-215ENST00000542340 MIGA1Q8NAN2 632 aa24.36■■□□□ 1.49
CACNA2D4-215ENST00000542340 PHF20L1A8MW92 1017 aa24.35■■□□□ 1.49
CACNA2D4-215ENST00000542340 NOL9Q5SY16 702 aaKnown RBP24.35■■□□□ 1.49
CACNA2D4-215ENST00000542340 TGFBRAP1Q8WUH2 860 aa24.35■■□□□ 1.49
CACNA2D4-215ENST00000542340 CNKSR2Q8WXI2 1034 aa24.35■■□□□ 1.49
CACNA2D4-215ENST00000542340 DHX36Q9H2U1 1008 aaKnown RBP24.35■■□□□ 1.49
CACNA2D4-215ENST00000542340 TESPA1A2RU30 521 aaPredicted RBP24.34■■□□□ 1.49
CACNA2D4-215ENST00000542340 OTUD5Q96G74 571 aa24.34■■□□□ 1.49
CACNA2D4-215ENST00000542340 MS4A4AQ96JQ5 239 aa24.34■■□□□ 1.49
CACNA2D4-215ENST00000542340 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.34■■□□□ 1.49
CACNA2D4-215ENST00000542340 FLT1P17948 1338 aa24.34■■□□□ 1.49
CACNA2D4-215ENST00000542340 ZNF532Q9HCE3 1301 aa24.34■■□□□ 1.49
CACNA2D4-215ENST00000542340 TCRBV5S4A2TA0A5A2 114 aa24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 ALDH1A1P00352 501 aa24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 GTF2A2P52657 109 aa24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 PPATQ06203 517 aa24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 IFNL1Q8IU54 200 aa24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 MAPKAPK5Q8IW41 473 aa24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 RWDD1Q9H446 243 aaPredicted RBP24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 ZBTB47Q9UFB7 747 aaPredicted RBP24.33■■□□□ 1.49
CACNA2D4-215ENST00000542340 MAGEB6P1A0A0J9YX57 407 aa24.32■■□□□ 1.48
CACNA2D4-215ENST00000542340 PPIL2Q13356 520 aa24.32■■□□□ 1.48
CACNA2D4-215ENST00000542340 ANKRD45Q5TZF3 282 aa24.32■■□□□ 1.48
CACNA2D4-215ENST00000542340 RIOK1Q9BRS2 568 aaKnown RBP24.32■■□□□ 1.48
CACNA2D4-215ENST00000542340 PI4KBQ9UBF8 816 aa24.32■■□□□ 1.48
CACNA2D4-215ENST00000542340 TTC41PQ6P2S7 1318 aa24.32■■□□□ 1.48
CACNA2D4-215ENST00000542340 LAMB1P07942 1786 aa24.31■■□□□ 1.48
CACNA2D4-215ENST00000542340 OTUD7BQ6GQQ9 843 aa24.31■■□□□ 1.48
CACNA2D4-215ENST00000542340 CFHR5Q9BXR6 569 aa24.31■■□□□ 1.48
CACNA2D4-215ENST00000542340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.31■■□□□ 1.48
CACNA2D4-215ENST00000542340 HERC5Q9UII4 1024 aaKnown RBP24.31■■□□□ 1.48
CACNA2D4-215ENST00000542340 CTNND1O60716 968 aaKnown RBP24.3■■□□□ 1.48
CACNA2D4-215ENST00000542340 SLURP2P0DP57 97 aa24.3■■□□□ 1.48
CACNA2D4-215ENST00000542340 ADD2P35612 726 aa24.3■■□□□ 1.48
CACNA2D4-215ENST00000542340 USP5P45974 858 aa24.3■■□□□ 1.48
CACNA2D4-215ENST00000542340 ZSCAN25Q6NSZ9 544 aa24.3■■□□□ 1.48
CACNA2D4-215ENST00000542340 SCYL3Q8IZE3 742 aa24.3■■□□□ 1.48
CACNA2D4-215ENST00000542340 IGF2BP3O00425 579 aaKnown RBP eCLIP24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 IRF6O14896 467 aa24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 ERC2O15083 957 aa24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 UBE3CQ15386 1083 aa24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 TSHZ3Q63HK5 1081 aa24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 FOXP4Q8IVH2 680 aaPredicted RBP24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 TNS4Q8IZW8 715 aa24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 PTPN18Q99952 460 aa24.29■■□□□ 1.48
CACNA2D4-215ENST00000542340 CCL15-CCL14A0A0B4J2E2 113 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 TBC1D8O95759 1140 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 CETPP11597 493 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 SNAPC2Q13487 334 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 CCL15Q16663 113 aa24.28■■□□□ 1.48
CACNA2D4-215ENST00000542340 METTL16Q86W50 562 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms