RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CLSPNQ9HAW4 1339 aa7.5□□□□□ -1.21
CPSF7-220ENST00000541963 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 KIF4AO95239 1232 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 USP17L7P0C7H9 530 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 XRCC5P13010 732 aaKnown RBP7.49□□□□□ -1.21
CPSF7-220ENST00000541963 PCBP4P57723 403 aaKnown RBP7.49□□□□□ -1.21
CPSF7-220ENST00000541963 GRM2Q14416 872 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 ZNF787Q6DD87 383 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 C8orf37Q96NL8 207 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 IGSF5Q9NSI5 407 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 DNAJB12Q9NXW2 375 aaKnown RBP7.49□□□□□ -1.21
CPSF7-220ENST00000541963 RGS17Q9UGC6 210 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-220ENST00000541963 ADGRB2O60241 1585 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 SPATA31A3Q5VYP0 1347 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 EVC2Q86UK5 1308 aa7.49□□□□□ -1.21
CPSF7-220ENST00000541963 SBNO1A3KN83 1393 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 SMNDC1O75940 238 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPSF7-220ENST00000541963 ARAFP10398 606 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 EIF2AK2P19525 551 aaKnown RBP7.48□□□□□ -1.21
CPSF7-220ENST00000541963 ALAS2P22557 587 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 MLLT1Q03111 559 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-220ENST00000541963 TAF1CQ15572 869 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-220ENST00000541963 DTHD1Q6ZMT9 781 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 HFE2Q6ZVN8 426 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 ARHGEF28Q8N1W1 1705 aaKnown RBP7.48□□□□□ -1.21
CPSF7-220ENST00000541963 CEP120Q8N960 986 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 LATS2Q9NRM7 1088 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 HCN2Q9UL51 889 aa7.48□□□□□ -1.21
CPSF7-220ENST00000541963 RGPD8O14715 1765 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-220ENST00000541963 TULP4Q9NRJ4 1543 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 ARHGEF10O15013 1369 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 H3BM21 787 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 RXRBP28702 533 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 ERCC5P28715 1186 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-220ENST00000541963 FCGRTP55899 365 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 NBPF8Q3BBV2 869 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-220ENST00000541963 FAM35AQ86V20 835 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 AKAP2Q9Y2D5 859 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 PXDNQ92626 1479 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 AFF2P51816 1311 aa7.47□□□□□ -1.21
CPSF7-220ENST00000541963 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 J3QW42 95 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 PDE2AO00408 941 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-220ENST00000541963 C2CD2LO14523 706 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 PEAR1Q5VY43 1037 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-220ENST00000541963 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 ZKSCAN3Q9BRR0 538 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 PBX4Q9BYU1 374 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 DZANK1Q9NVP4 752 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 USP21Q9UK80 565 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 TTF2Q9UNY4 1162 aaKnown RBP7.46□□□□□ -1.22
CPSF7-220ENST00000541963 PRR36Q9H6K5 1346 aa7.46□□□□□ -1.22
CPSF7-220ENST00000541963 LRP6O75581 1613 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 TRPM1Q7Z4N2 1603 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 ZBTB42B2RXF5 422 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 LCE2BO14633 110 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 CPB1P15086 417 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 ADH7P40394 386 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 ST13P50502 369 aaKnown RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 RBM6P78332 1123 aaKnown RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 HDLBPQ00341 1268 aaKnown RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 PRPF40BQ6NWY9 871 aaKnown RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 CCNJLQ8IV13 435 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 GOLGA6L1Q8N7Z2 621 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 TMEM102Q8N9M5 508 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 ASAP3Q8TDY4 903 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 TNFRSF25Q93038 417 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 OXCT2Q9BYC2 517 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 GDF2Q9UK05 429 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 TRPC5Q9UL62 973 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 SLC6A14Q9UN76 642 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-220ENST00000541963 ACEP12821 1306 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 USP31Q70CQ4 1352 aa7.45□□□□□ -1.22
CPSF7-220ENST00000541963 TNS3Q68CZ2 1445 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 ITSN1Q15811 1721 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 NEURL1BA8MQ27 555 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 ADARB2-AS1A8MUL3 147 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 TERTO14746 1132 aaKnown RBP7.44□□□□□ -1.22
CPSF7-220ENST00000541963 CTSHP09668 335 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 C9orf131Q5VYM1 1079 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 CEP135Q66GS9 1140 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 IRF7Q92985 503 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-220ENST00000541963 PPM1HQ9ULR3 514 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 USP32Q8NFA0 1604 aa7.44□□□□□ -1.22
CPSF7-220ENST00000541963 COL22A1Q8NFW1 1626 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-220ENST00000541963 BRD4O60885 1362 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-220ENST00000541963 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-220ENST00000541963 ELOA3DA6NLF2 546 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-220ENST00000541963 FANCCQ00597 558 aa7.43□□□□□ -1.22
CPSF7-220ENST00000541963 GAS6Q14393 721 aa7.43□□□□□ -1.22
CPSF7-220ENST00000541963 ELOA3BQ3SY89 546 aa7.43□□□□□ -1.22
CPSF7-220ENST00000541963 NT5DC4Q86YG4 428 aa7.43□□□□□ -1.22
CPSF7-220ENST00000541963 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms