RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 PDE4BQ07343 736 aa15.62■□□□□ 0.09
PTPN1-202ENST00000541713 AXDND1Q5T1B0 1012 aaPredicted RBP15.62■□□□□ 0.09
PTPN1-202ENST00000541713 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
PTPN1-202ENST00000541713 KCNH3Q9ULD8 1083 aa15.62■□□□□ 0.09
PTPN1-202ENST00000541713 SLIT3O75094 1523 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
PTPN1-202ENST00000541713 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
PTPN1-202ENST00000541713 ADGRA1Q86SQ6 560 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 DESI2Q9BSY9 194 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 SERTAD1Q9UHV2 236 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 OVOS2A0A0G2JMS6 1433 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 CSF1RP07333 972 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 RTN1Q16799 776 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
PTPN1-202ENST00000541713 FOXP4Q8IVH2 680 aaPredicted RBP15.61■□□□□ 0.09
PTPN1-202ENST00000541713 URI1O94763 535 aaPredicted RBP15.6■□□□□ 0.09
PTPN1-202ENST00000541713 CCZ1BP86790 482 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 CCZ1P86791 482 aaPredicted RBP15.6■□□□□ 0.09
PTPN1-202ENST00000541713 ZNF174Q15697 407 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 ERCC6LQ2NKX8 1250 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 AGXT2Q9BYV1 514 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 LY9Q9HBG7 655 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 ST7Q9NRC1 585 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 V9GY48 417 aaPredicted RBP15.6■□□□□ 0.09
PTPN1-202ENST00000541713 PDIA4P13667 645 aaKnown RBP15.6■□□□□ 0.09
PTPN1-202ENST00000541713 KARSQ15046 597 aaKnown RBP15.6■□□□□ 0.09
PTPN1-202ENST00000541713 JCADQ9P266 1359 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
PTPN1-202ENST00000541713 TRIM22Q8IYM9 498 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 LPIN2Q92539 896 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 UIMC1Q96RL1 719 aa15.6■□□□□ 0.09
PTPN1-202ENST00000541713 GSG1L2A8MUP6 293 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 SLC39A14Q15043 492 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 IGDCC4Q8TDY8 1250 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 KLRK1P26718 216 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 CRKLP46109 303 aaKnown RBP15.59■□□□□ 0.09
PTPN1-202ENST00000541713 EPSTI1Q96J88 318 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 GPR101Q96P66 508 aaPredicted RBP15.59■□□□□ 0.09
PTPN1-202ENST00000541713 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.59■□□□□ 0.09
PTPN1-202ENST00000541713 ZMYM6O95789 1325 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 CHRNDQ07001 517 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 POLR3EQ9NVU0 708 aa15.59■□□□□ 0.09
PTPN1-202ENST00000541713 SMTNL1A8MU46 457 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 NLRP12P59046 1061 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 TTF1Q15361 905 aaPredicted RBP15.58■□□□□ 0.09
PTPN1-202ENST00000541713 AKNAD1Q5T1N1 836 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 RASSF8Q8NHQ8 419 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 MRFAP1L1Q96HT8 127 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 BLZF1Q9H2G9 400 aa15.58■□□□□ 0.09
PTPN1-202ENST00000541713 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.09
PTPN1-202ENST00000541713 PATL2C9JE40 543 aaKnown RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 BRAPQ7Z569 592 aa15.58■□□□□ 0.08
PTPN1-202ENST00000541713 KIF18AQ8NI77 898 aa15.58■□□□□ 0.08
PTPN1-202ENST00000541713 CDKL5O76039 1030 aa15.58■□□□□ 0.08
PTPN1-202ENST00000541713 PLEKHA8P1O95397 391 aa15.58■□□□□ 0.08
PTPN1-202ENST00000541713 TOP1P11387 765 aaKnown RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 VEGFAP15692 232 aaPredicted RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 DHX8Q14562 1220 aaKnown RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 SART3Q15020 963 aaKnown RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.08
PTPN1-202ENST00000541713 METTL16Q86W50 562 aaKnown RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 SAMSN1Q9NSI8 373 aaKnown RBP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 AATFQ9NY61 560 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTPN1-202ENST00000541713 YEATS4O95619 227 aa15.57■□□□□ 0.08
PTPN1-202ENST00000541713 ERCC3P19447 782 aa15.57■□□□□ 0.08
PTPN1-202ENST00000541713 CMA1P23946 247 aa15.57■□□□□ 0.08
PTPN1-202ENST00000541713 E4F1Q66K89 784 aaPredicted RBP15.57■□□□□ 0.08
PTPN1-202ENST00000541713 ZNF771Q7L3S4 317 aaPredicted RBP15.57■□□□□ 0.08
PTPN1-202ENST00000541713 ERICH4A6NGS2 130 aa15.57■□□□□ 0.08
PTPN1-202ENST00000541713 CYP2D6P10635 497 aa15.57■□□□□ 0.08
PTPN1-202ENST00000541713 EARS2Q5JPH6 523 aaKnown RBP15.56■□□□□ 0.08
PTPN1-202ENST00000541713 TEX13AQ9BXU3 409 aaPredicted RBP15.56■□□□□ 0.08
PTPN1-202ENST00000541713 IRX2Q9BZI1 471 aaPredicted RBP15.56■□□□□ 0.08
PTPN1-202ENST00000541713 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 NFE2L3Q9Y4A8 694 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.56■□□□□ 0.08
PTPN1-202ENST00000541713 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 VWA3AA6NCI4 1184 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 WNT7AO00755 349 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 DDB1Q16531 1140 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 NOSTRINQ8IVI9 506 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 RASGRP4Q8TDF6 673 aa15.56■□□□□ 0.08
PTPN1-202ENST00000541713 FMR1Q06787 632 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTPN1-202ENST00000541713 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 AEBP2Q6ZN18 517 aaPredicted RBP15.55■□□□□ 0.08
PTPN1-202ENST00000541713 ZNF654Q8IZM8 581 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 CSRNP2Q9H175 543 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 TNKSO95271 1327 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 USP17L12C9JPN9 530 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 USP17L21D6R901 530 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 ITPK1Q13572 414 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 KRI1Q8N9T8 703 aaKnown RBP15.55■□□□□ 0.08
PTPN1-202ENST00000541713 PPP1R13BQ96KQ4 1090 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 LZTFL1Q9NQ48 299 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 NRDCO43847 1150 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 UQCRFS1P1P0C7P4 283 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 BMP6P22004 513 aa15.55■□□□□ 0.08
PTPN1-202ENST00000541713 CCT6AP40227 531 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms