RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 CYP2C8P10632 490 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 PTPRAP18433 802 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 RGS3P49796 1198 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 FCGRTP55899 365 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 FAM163AQ96GL9 167 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-207ENST00000541661 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
SCARB1-207ENST00000541661 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
SCARB1-207ENST00000541661 UBXN2AP68543 259 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 PRKCZQ05513 592 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
SCARB1-207ENST00000541661 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 SZT2Q5T011 3432 aa16.28■□□□□ 0.2
SCARB1-207ENST00000541661 DOCK1Q14185 1865 aa16.27■□□□□ 0.2
SCARB1-207ENST00000541661 CTNND1O60716 968 aaKnown RBP16.27■□□□□ 0.2
SCARB1-207ENST00000541661 SLF2Q8IX21 1173 aa16.27■□□□□ 0.2
SCARB1-207ENST00000541661 DPF3Q92784 378 aa16.27■□□□□ 0.2
SCARB1-207ENST00000541661 RNF208Q9H0X6 261 aa16.27■□□□□ 0.2
SCARB1-207ENST00000541661 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
SCARB1-207ENST00000541661 DDTLA6NHG4 134 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-207ENST00000541661 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-207ENST00000541661 CAPN2P17655 700 aa16.26■□□□□ 0.19
SCARB1-207ENST00000541661 ADORA1P30542 326 aa16.26■□□□□ 0.19
SCARB1-207ENST00000541661 HTATIP2Q9BUP3 242 aa16.26■□□□□ 0.19
SCARB1-207ENST00000541661 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-207ENST00000541661 PA2G4Q9UQ80 394 aaKnown RBP16.26■□□□□ 0.19
SCARB1-207ENST00000541661 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
SCARB1-207ENST00000541661 TRIOBPQ9H2D6 2365 aa16.26■□□□□ 0.19
SCARB1-207ENST00000541661 IRF5Q13568 498 aa16.25■□□□□ 0.19
SCARB1-207ENST00000541661 RASGRF1Q13972 1273 aa16.25■□□□□ 0.19
SCARB1-207ENST00000541661 SPTY2D1Q68D10 685 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-207ENST00000541661 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
SCARB1-207ENST00000541661 PXYLP1Q8TE99 480 aa16.25■□□□□ 0.19
SCARB1-207ENST00000541661 U2AF1L4Q8WU68 220 aaKnown RBP16.25■□□□□ 0.19
SCARB1-207ENST00000541661 CDCA7LQ96GN5 454 aa16.25■□□□□ 0.19
SCARB1-207ENST00000541661 DDX4Q9NQI0 724 aaKnown RBP16.25■□□□□ 0.19
SCARB1-207ENST00000541661 NOB1Q9ULX3 412 aaKnown RBP16.25■□□□□ 0.19
SCARB1-207ENST00000541661 RANBP2P49792 3224 aaKnown RBP16.24■□□□□ 0.19
SCARB1-207ENST00000541661 ADCY3O60266 1144 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 TBC1D12O60347 775 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
SCARB1-207ENST00000541661 SGPL1O95470 568 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 FLT3LGP49771 235 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 TIMM10P62072 90 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 DZIP1Q86YF9 867 aaKnown RBP16.24■□□□□ 0.19
SCARB1-207ENST00000541661 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-207ENST00000541661 API5Q9BZZ5 524 aaKnown RBP16.24■□□□□ 0.19
SCARB1-207ENST00000541661 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 PRO3102Q9H379 93 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 RBM27Q9P2N5 1060 aaKnown RBP16.24■□□□□ 0.19
SCARB1-207ENST00000541661 ABCF2Q9UG63 623 aa16.24■□□□□ 0.19
SCARB1-207ENST00000541661 MROH7-TTC4A0A0A0MT08 1334 aa16.23■□□□□ 0.19
SCARB1-207ENST00000541661 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
SCARB1-207ENST00000541661 BTDP43251 543 aa16.23■□□□□ 0.19
SCARB1-207ENST00000541661 NR2E3Q9Y5X4 410 aa16.23■□□□□ 0.19
SCARB1-207ENST00000541661 MAP4K4O95819 1239 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-207ENST00000541661 SLURP2P0DP57 97 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 RHBDL3P58872 404 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 ZNF384Q8TF68 577 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 MEIS3Q99687 375 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 DOCK3Q8IZD9 2030 aa16.22■□□□□ 0.19
SCARB1-207ENST00000541661 A0A1B0GUL7 405 aa16.21■□□□□ 0.19
SCARB1-207ENST00000541661 TRIM75PA6NK02 468 aa16.21■□□□□ 0.19
SCARB1-207ENST00000541661 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 MECOMQ03112 1051 aa16.21■□□□□ 0.19
SCARB1-207ENST00000541661 PICALMQ13492 652 aa16.21■□□□□ 0.19
SCARB1-207ENST00000541661 MTX1Q13505 466 aa16.21■□□□□ 0.19
SCARB1-207ENST00000541661 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
SCARB1-207ENST00000541661 PROCA1Q8NCQ7 364 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 COL2A1P02458 1487 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-207ENST00000541661 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.18
SCARB1-207ENST00000541661 INHAP05111 366 aa16.2■□□□□ 0.18
SCARB1-207ENST00000541661 ELNP15502 786 aa16.2■□□□□ 0.18
SCARB1-207ENST00000541661 TFCP2Q12800 502 aa16.2■□□□□ 0.18
SCARB1-207ENST00000541661 ARHGAP45Q92619 1136 aa16.2■□□□□ 0.18
SCARB1-207ENST00000541661 OSBPL5Q9H0X9 879 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-207ENST00000541661 PAK6Q9NQU5 681 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-207ENST00000541661 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 LDHCP07864 332 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 FAM110CQ1W6H9 321 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 COA7Q96BR5 231 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 NSUN4Q96CB9 384 aaKnown RBP16.19■□□□□ 0.18
SCARB1-207ENST00000541661 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 CRISPLD2Q9H0B8 497 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms