RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 POLA2Q14181 598 aa17.3■□□□□ 0.36
SUDS3-203ENST00000541591 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
SUDS3-203ENST00000541591 ERO1BQ86YB8 467 aa17.3■□□□□ 0.36
SUDS3-203ENST00000541591 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
SUDS3-203ENST00000541591 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
SUDS3-203ENST00000541591 KIAA0100Q14667 2235 aaKnown RBP17.29■□□□□ 0.36
SUDS3-203ENST00000541591 ATRNL1Q5VV63 1379 aa17.29■□□□□ 0.36
SUDS3-203ENST00000541591 DDTLA6NHG4 134 aaPredicted RBP17.29■□□□□ 0.36
SUDS3-203ENST00000541591 BTBD19C9JJ37 291 aa17.29■□□□□ 0.36
SUDS3-203ENST00000541591 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
SUDS3-203ENST00000541591 ARID4AP29374 1257 aaPredicted RBP17.29■□□□□ 0.36
SUDS3-203ENST00000541591 ATP8B2P98198 1209 aa17.29■□□□□ 0.36
SUDS3-203ENST00000541591 PPIL2Q13356 520 aa17.29■□□□□ 0.36
SUDS3-203ENST00000541591 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
SUDS3-203ENST00000541591 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
SUDS3-203ENST00000541591 LOC285556D6RIA3 1793 aa17.29■□□□□ 0.36
SUDS3-203ENST00000541591 PDS5AQ29RF7 1337 aaKnown RBP17.28■□□□□ 0.36
SUDS3-203ENST00000541591 SP3Q02447 781 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
SUDS3-203ENST00000541591 TNNI3KQ59H18 835 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
SUDS3-203ENST00000541591 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 ERO1AQ96HE7 468 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 ARHGAP39Q9C0H5 1083 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 FPGT-TNNI3KV9GXZ4 949 aa17.28■□□□□ 0.36
SUDS3-203ENST00000541591 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
SUDS3-203ENST00000541591 SNAPC2Q13487 334 aa17.27■□□□□ 0.36
SUDS3-203ENST00000541591 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
SUDS3-203ENST00000541591 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.36
SUDS3-203ENST00000541591 ZFYVE28Q9HCC9 887 aa17.27■□□□□ 0.36
SUDS3-203ENST00000541591 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.35
SUDS3-203ENST00000541591 CETPP11597 493 aa17.26■□□□□ 0.35
SUDS3-203ENST00000541591 RHBDL3P58872 404 aa17.26■□□□□ 0.35
SUDS3-203ENST00000541591 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
SUDS3-203ENST00000541591 EFCC1Q9HA90 598 aa17.26■□□□□ 0.35
SUDS3-203ENST00000541591 ZNF112Q9UJU3 913 aa17.26■□□□□ 0.35
SUDS3-203ENST00000541591 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
SUDS3-203ENST00000541591 ENTPD3O75355 529 aa17.25■□□□□ 0.35
SUDS3-203ENST00000541591 MYCP01106 439 aaPredicted RBP17.25■□□□□ 0.35
SUDS3-203ENST00000541591 PPATQ06203 517 aa17.25■□□□□ 0.35
SUDS3-203ENST00000541591 CEP85Q6P2H3 762 aa17.25■□□□□ 0.35
SUDS3-203ENST00000541591 SH3RF3Q8TEJ3 882 aaPredicted RBP17.25■□□□□ 0.35
SUDS3-203ENST00000541591 LRP2BPQ9P2M1 347 aa17.25■□□□□ 0.35
SUDS3-203ENST00000541591 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
SUDS3-203ENST00000541591 PTPN22Q9Y2R2 807 aa17.25■□□□□ 0.35
SUDS3-203ENST00000541591 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
SUDS3-203ENST00000541591 PHF20L1A8MW92 1017 aa17.24■□□□□ 0.35
SUDS3-203ENST00000541591 APBB1O00213 710 aa17.24■□□□□ 0.35
SUDS3-203ENST00000541591 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
SUDS3-203ENST00000541591 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
SUDS3-203ENST00000541591 SLF2Q8IX21 1173 aa17.24■□□□□ 0.35
SUDS3-203ENST00000541591 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
SUDS3-203ENST00000541591 POTEFA5A3E0 1075 aa17.23■□□□□ 0.35
SUDS3-203ENST00000541591 CYP2E1P05181 493 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
SUDS3-203ENST00000541591 ZAP70P43403 619 aa17.23■□□□□ 0.35
SUDS3-203ENST00000541591 MOGSQ13724 837 aa17.23■□□□□ 0.35
SUDS3-203ENST00000541591 NOL9Q5SY16 702 aaKnown RBP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
SUDS3-203ENST00000541591 EAF2Q96CJ1 260 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 FAM163AQ96GL9 167 aaPredicted RBP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 AATFQ9NY61 560 aaKnown RBP eCLIP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 PTCH2Q9Y6C5 1203 aa17.23■□□□□ 0.35
SUDS3-203ENST00000541591 DDX60LQ5H9U9 1706 aaKnown RBP17.23■□□□□ 0.35
SUDS3-203ENST00000541591 BRCA2P51587 3418 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 PDHXO00330 501 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 CTGFP29279 349 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 GADL1Q6ZQY3 521 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 SCYL3Q8IZE3 742 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 ZHX2Q9Y6X8 837 aa17.22■□□□□ 0.35
SUDS3-203ENST00000541591 ZBTB22O15209 634 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 TLR2O60603 784 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 CYP2C8P10632 490 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 GSTO1P78417 241 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 NAA16Q6N069 864 aaPredicted RBP17.21■□□□□ 0.35
SUDS3-203ENST00000541591 OSBPL5Q9H0X9 879 aaPredicted RBP17.21■□□□□ 0.35
SUDS3-203ENST00000541591 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 PICK1Q9NRD5 415 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
SUDS3-203ENST00000541591 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
SUDS3-203ENST00000541591 LDHCP07864 332 aa17.2■□□□□ 0.34
SUDS3-203ENST00000541591 PTPRAP18433 802 aa17.2■□□□□ 0.34
SUDS3-203ENST00000541591 DYNLL1P63167 89 aaKnown RBP17.2■□□□□ 0.34
SUDS3-203ENST00000541591 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
SUDS3-203ENST00000541591 MAPKAPK5Q8IW41 473 aa17.2■□□□□ 0.34
SUDS3-203ENST00000541591 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
SUDS3-203ENST00000541591 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
SUDS3-203ENST00000541591 ADGRA2Q96PE1 1338 aa17.2■□□□□ 0.34
SUDS3-203ENST00000541591 PLXNB2O15031 1838 aa17.19■□□□□ 0.34
SUDS3-203ENST00000541591 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
SUDS3-203ENST00000541591 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
SUDS3-203ENST00000541591 ANKRD23Q86SG2 305 aa17.19■□□□□ 0.34
SUDS3-203ENST00000541591 AACSQ86V21 672 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms