RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 BRICD5Q6PL45 260 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 PODNQ7Z5L7 613 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 TICAM2Q86XR7 235 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 PLEKHM2Q8IWE5 1019 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 C16orf71Q8IYS4 520 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 ANKLE1Q8NAG6 615 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 PI4K2BQ8TCG2 481 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 OTUD7AQ8TE49 926 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 THAP11Q96EK4 314 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 NEUROD6Q96NK8 337 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 BEGAINQ9BUH8 593 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 CCDC8Q9H0W5 538 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 CD209Q9NNX6 404 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 V9GY48 417 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 DUOX1Q9NRD9 1551 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 FAM205AQ6ZU69 1335 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 SALL1Q9NSC2 1324 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 ZC3H4Q9UPT8 1303 aaKnown RBP6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 LMNB1P20700 586 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 GYG1P46976 350 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 PRELPP51888 382 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 FKBP1AP62942 108 aaKnown RBP6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 RASGRF1Q13972 1273 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 GPR162Q16538 588 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 AOC3Q16853 763 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 GORABQ5T7V8 394 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 TMED8Q6PL24 325 aaPredicted RBP6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 ARHGAP27Q6ZUM4 889 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 VPS37DQ86XT2 251 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 LARGE2Q8N3Y3 721 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 HAUS7Q99871 368 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 ZNF277Q9NRM2 450 aaPredicted RBP6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 WWC3Q9ULE0 1092 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 DENND2AQ9ULE3 1009 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 LRRC37AA6NMS7 1700 aa6.08□□□□□ -1.44
SPARCL1-209ENST00000541496 FZD9O00144 591 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 MCAMP43121 646 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 RASSF7Q02833 373 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 SCARF1Q14162 830 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 BMP2KLQ5H9B9 411 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 TTC39AQ5SRH9 613 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 STRIP1Q5VSL9 837 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 NIM1KQ8IY84 436 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 SPATA5Q8NB90 893 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 WDR66Q8TBY9 1149 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 TBC1D22AQ8WUA7 517 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 SPIRE2Q8WWL2 714 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 GPR101Q96P66 508 aaPredicted RBP6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 HMG20BQ9P0W2 317 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 ZNRF3Q9ULT6 936 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 SUGT1Q9Y2Z0 365 aa6.07□□□□□ -1.44
SPARCL1-209ENST00000541496 DLEC1Q9Y238 1755 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 LTBP1Q14766 1721 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 USP17L3A6NCW0 530 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 USP17L4A6NCW7 530 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 YDJCA8MPS7 323 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 RNF223E7ERA6 249 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 ECE2O60344 883 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 S1PR4O95977 384 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 VIL1P09327 827 aaKnown RBP6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 FDX1P10109 184 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 MMP14P50281 582 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 TTF1Q15361 905 aaPredicted RBP6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 TTC22Q5TAA0 569 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 USP17L1Q7RTZ2 530 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 ZGPATQ8N5A5 531 aaKnown RBP6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 USB1Q9BQ65 265 aaKnown RBP6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 BOLA2Q9H3K6 86 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 DBNDD1Q9H9R9 158 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 RFX7Q2KHR2 1363 aa6.06□□□□□ -1.44
SPARCL1-209ENST00000541496 MYO3BQ8WXR4 1341 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 COL1A1P02452 1464 aaPredicted RBP6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 SLX4Q8IY92 1834 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 SPDYE5A6NIY4 337 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 FRAT2O75474 233 aaPredicted RBP6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 CYP2E1P05181 493 aaPredicted RBP6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 GSPT1P15170 499 aaKnown RBP6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 RPS12P25398 132 aaKnown RBP6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 ZAP70P43403 619 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 CXCL9Q07325 125 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 TNIP1Q15025 636 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 MFSD14BQ5SR56 506 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 DACT2Q5SW24 774 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 C9orf131Q5VYM1 1079 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 TSHZ3Q63HK5 1081 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 TTLL5Q6EMB2 1281 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 RETREG3Q86VR2 466 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 KBTBD3Q8NAB2 608 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 EVI5LQ96CN4 794 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 DDRGK1Q96HY6 314 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 GMLQ99445 158 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 MRIQ9BWK5 157 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 TBC1D2Q9BYX2 928 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 PAG1Q9NWQ8 432 aa6.05□□□□□ -1.44
SPARCL1-209ENST00000541496 GOLIM4O00461 696 aa6.04□□□□□ -1.44
SPARCL1-209ENST00000541496 PSMD14O00487 310 aa6.04□□□□□ -1.44
SPARCL1-209ENST00000541496 ZFYP08048 801 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms