RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 FGD1P98174 961 aa6.87□□□□□ -1.31
KNTC1-211ENST00000541427 RPS26P11Q5JNZ5 115 aaPredicted RBP6.87□□□□□ -1.31
KNTC1-211ENST00000541427 FRMD6Q96NE9 622 aa6.87□□□□□ -1.31
KNTC1-211ENST00000541427 NRSN2Q9GZP1 204 aa6.87□□□□□ -1.31
KNTC1-211ENST00000541427 SOX17Q9H6I2 414 aaPredicted RBP6.87□□□□□ -1.31
KNTC1-211ENST00000541427 XRCC5P13010 732 aaKnown RBP6.86□□□□□ -1.31
KNTC1-211ENST00000541427 GSTT1P30711 240 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 MAP7Q14244 749 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 SPRED2Q7Z698 418 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 WFDC3Q8IUB2 231 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 RGS22Q8NE09 1264 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 TRIM56Q9BRZ2 755 aaKnown RBP6.86□□□□□ -1.31
KNTC1-211ENST00000541427 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 FAM8A1Q9UBU6 413 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 AKAP2Q9Y2D5 859 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
KNTC1-211ENST00000541427 ZNF16P17020 682 aaPredicted RBP6.85□□□□□ -1.31
KNTC1-211ENST00000541427 RAB6AP20340 208 aa6.85□□□□□ -1.31
KNTC1-211ENST00000541427 EIF4BP23588 611 aaKnown RBP6.85□□□□□ -1.31
KNTC1-211ENST00000541427 ZNF157P51786 506 aaPredicted RBP6.85□□□□□ -1.31
KNTC1-211ENST00000541427 GSTM4Q03013 218 aa6.85□□□□□ -1.31
KNTC1-211ENST00000541427 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
KNTC1-211ENST00000541427 STK11IPQ8N1F8 1099 aa6.85□□□□□ -1.31
KNTC1-211ENST00000541427 FAM168AQ92567 244 aa6.85□□□□□ -1.31
KNTC1-211ENST00000541427 ACTL7BQ9Y614 415 aa6.85□□□□□ -1.31
KNTC1-211ENST00000541427 ADH5P11766 374 aa6.84□□□□□ -1.31
KNTC1-211ENST00000541427 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
KNTC1-211ENST00000541427 PSMD2Q13200 908 aa6.84□□□□□ -1.31
KNTC1-211ENST00000541427 TMEM40Q8WWA1 233 aa6.84□□□□□ -1.31
KNTC1-211ENST00000541427 FBXO24O75426 580 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 ECEL1O95672 775 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 CTSBP07858 339 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 CTSHP09668 335 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 SLC38A3Q99624 504 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 SEMA6CQ9H3T2 930 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 RC3H2Q9HBD1 1191 aaKnown RBP6.83□□□□□ -1.32
KNTC1-211ENST00000541427 ZFYVE1Q9HBF4 777 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
KNTC1-211ENST00000541427 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
KNTC1-211ENST00000541427 BNIP3Q12983 259 aa6.82□□□□□ -1.32
KNTC1-211ENST00000541427 ZNF326Q5BKZ1 582 aaKnown RBP6.82□□□□□ -1.32
KNTC1-211ENST00000541427 TPTE2Q6XPS3 522 aa6.82□□□□□ -1.32
KNTC1-211ENST00000541427 GPN3Q9UHW5 284 aaPredicted RBP6.82□□□□□ -1.32
KNTC1-211ENST00000541427 PPM1HQ9ULR3 514 aa6.82□□□□□ -1.32
KNTC1-211ENST00000541427 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
KNTC1-211ENST00000541427 ENC1O14682 589 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 SORBS3O60504 671 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 ZNF865P0CJ78 1059 aaPredicted RBP6.81□□□□□ -1.32
KNTC1-211ENST00000541427 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 MEI1Q5TIA1 1274 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 STK35Q8TDR2 534 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
KNTC1-211ENST00000541427 TMEM39AQ9NV64 488 aa6.81□□□□□ -1.32
KNTC1-211ENST00000541427 PAGE1O75459 146 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 CYP11A1P05108 521 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
KNTC1-211ENST00000541427 CELA3AP09093 270 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 FUT4P22083 530 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 MAOBP27338 520 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 MRPL58Q14197 206 aaKnown RBP6.8□□□□□ -1.32
KNTC1-211ENST00000541427 OGFOD3Q6PK18 319 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 DYMQ7RTS9 669 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 MISP3Q96FF7 219 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 ACSS3Q9H6R3 686 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 C1GALT1Q9NS00 363 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 MBNL3Q9NUK0 354 aaKnown RBP6.8□□□□□ -1.32
KNTC1-211ENST00000541427 FAM105AQ9NUU6 356 aa6.8□□□□□ -1.32
KNTC1-211ENST00000541427 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.79□□□□□ -1.32
KNTC1-211ENST00000541427 CD8BP10966 210 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 MESP2Q0VG99 397 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 POU4F3Q15319 338 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 SEZ6L2Q6UXD5 910 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 CRELD1Q96HD1 420 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 MRS2Q9HD23 443 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 ADAMTS6Q9UKP5 1117 aa6.79□□□□□ -1.32
KNTC1-211ENST00000541427 TTF2Q9UNY4 1162 aaKnown RBP6.79□□□□□ -1.32
KNTC1-211ENST00000541427 DYNC1LI2O43237 492 aaPredicted RBP6.78□□□□□ -1.32
KNTC1-211ENST00000541427 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
KNTC1-211ENST00000541427 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
KNTC1-211ENST00000541427 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
KNTC1-211ENST00000541427 PDZD3Q86UT5 571 aa6.78□□□□□ -1.32
KNTC1-211ENST00000541427 SULF2Q8IWU5 870 aa6.78□□□□□ -1.32
KNTC1-211ENST00000541427 DDX54Q8TDD1 881 aaKnown RBP6.78□□□□□ -1.32
KNTC1-211ENST00000541427 FAM84AQ96KN4 292 aa6.78□□□□□ -1.32
KNTC1-211ENST00000541427 CEP44Q9C0F1 390 aa6.78□□□□□ -1.32
KNTC1-211ENST00000541427 ASPAP45381 313 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 AKAP4Q5JQC9 854 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 PLD6Q8N2A8 252 aaKnown RBP6.77□□□□□ -1.33
KNTC1-211ENST00000541427 LRRN4CLQ8ND94 238 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
KNTC1-211ENST00000541427 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 DAGLAQ9Y4D2 1042 aa6.77□□□□□ -1.33
KNTC1-211ENST00000541427 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
KNTC1-211ENST00000541427 BMP6P22004 513 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms