RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
CHFR-219ENST00000541341 GSDMDP57764 484 aa12.15□□□□□ -0.46
CHFR-219ENST00000541341 PRKG1Q13976 671 aa12.15□□□□□ -0.46
CHFR-219ENST00000541341 SLFNL1Q499Z3 407 aa12.15□□□□□ -0.46
CHFR-219ENST00000541341 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
CHFR-219ENST00000541341 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
CHFR-219ENST00000541341 CSRNP1Q96S65 589 aa12.15□□□□□ -0.46
CHFR-219ENST00000541341 NAT10Q9H0A0 1025 aaKnown RBP12.15□□□□□ -0.46
CHFR-219ENST00000541341 ZSCAN16Q9H4T2 348 aaPredicted RBP12.15□□□□□ -0.46
CHFR-219ENST00000541341 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
CHFR-219ENST00000541341 GOLGA6L19H0YKK7 550 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 SLC10A3P09131 477 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 TPM1P09493 284 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
CHFR-219ENST00000541341 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
CHFR-219ENST00000541341 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
CHFR-219ENST00000541341 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
CHFR-219ENST00000541341 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 TNMDQ9H2S6 317 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 GREM2Q9H772 168 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 MYOZ2Q9NPC6 264 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
CHFR-219ENST00000541341 XDHP47989 1333 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 APBB1O00213 710 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 SASH1O94885 1247 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 TPM4P67936 248 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 MTX1Q13505 466 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 POLA2Q14181 598 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 RASAL3Q86YV0 1011 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 TDRD7Q8NHU6 1098 aaKnown RBP12.13□□□□□ -0.47
CHFR-219ENST00000541341 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
CHFR-219ENST00000541341 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 CSF1RP07333 972 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 KLRK1P26718 216 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 KCNJ6P48051 423 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 RGS19P49795 217 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 AK2P54819 239 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 CTSWP56202 376 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 ZNF280AP59817 542 aaPredicted RBP12.12□□□□□ -0.47
CHFR-219ENST00000541341 FOXO4P98177 505 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 LARP1BQ659C4 914 aaKnown RBP12.12□□□□□ -0.47
CHFR-219ENST00000541341 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
CHFR-219ENST00000541341 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 TXNRD3Q86VQ6 643 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 MRFAP1L1Q96HT8 127 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 EXOC6BQ9Y2D4 811 aa12.12□□□□□ -0.47
CHFR-219ENST00000541341 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 TBC1D8O95759 1140 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 GJB2P29033 226 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 KRT222Q8N1A0 295 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 TTLL11Q8NHH1 800 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 RHPN1Q8TCX5 695 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 GMLQ99445 158 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 TTC12Q9H892 705 aaPredicted RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 MINPP1Q9UNW1 487 aa12.11□□□□□ -0.47
CHFR-219ENST00000541341 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 MORC2Q9Y6X9 1032 aaPredicted RBP12.11□□□□□ -0.47
CHFR-219ENST00000541341 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 RFX7Q2KHR2 1363 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 FIBPO43427 364 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 SURF6O75683 361 aaKnown RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 TUBB4BP68371 445 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 TYRO3Q06418 890 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 CLSTN2Q9H4D0 955 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 BICC1Q9H694 974 aaKnown RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 ARGLU1Q9NWB6 273 aaPredicted RBP12.1□□□□□ -0.47
CHFR-219ENST00000541341 CALCOCO1Q9P1Z2 691 aa12.1□□□□□ -0.47
CHFR-219ENST00000541341 PALD1Q9ULE6 856 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms