RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 SCYL3Q8IZE3 742 aa29.68■■■□□ 2.34
LEMD3-203ENST00000541171 FRAT1Q92837 279 aaPredicted RBP29.68■■■□□ 2.34
LEMD3-203ENST00000541171 GCC1Q96CN9 775 aa29.68■■■□□ 2.34
LEMD3-203ENST00000541171 DDX4Q9NQI0 724 aaKnown RBP29.68■■■□□ 2.34
LEMD3-203ENST00000541171 ZHX2Q9Y6X8 837 aa29.68■■■□□ 2.34
LEMD3-203ENST00000541171 ATRNL1Q5VV63 1379 aa29.67■■■□□ 2.34
LEMD3-203ENST00000541171 DDTLA6NHG4 134 aaPredicted RBP29.67■■■□□ 2.34
LEMD3-203ENST00000541171 CXCL11O14625 94 aa29.67■■■□□ 2.34
LEMD3-203ENST00000541171 PRMT2P55345 433 aa29.67■■■□□ 2.34
LEMD3-203ENST00000541171 MTX1Q13505 466 aa29.67■■■□□ 2.34
LEMD3-203ENST00000541171 TRIM47Q96LD4 638 aa29.67■■■□□ 2.34
LEMD3-203ENST00000541171 PDS5AQ29RF7 1337 aaKnown RBP29.67■■■□□ 2.34
LEMD3-203ENST00000541171 IPO8O15397 1037 aaKnown RBP29.66■■■□□ 2.34
LEMD3-203ENST00000541171 CYP2C8P10632 490 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 MECOMQ03112 1051 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 GORABQ5T7V8 394 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 GPAT2Q6NUI2 795 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 FAM163AQ96GL9 167 aaPredicted RBP29.66■■■□□ 2.34
LEMD3-203ENST00000541171 PCDH10Q9P2E7 1040 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 MKI67P46013 3256 aaKnown RBP29.66■■■□□ 2.34
LEMD3-203ENST00000541171 MROH7-TTC4A0A0A0MT08 1334 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 ADGRA2Q96PE1 1338 aa29.66■■■□□ 2.34
LEMD3-203ENST00000541171 PTPRAP18433 802 aa29.65■■■□□ 2.34
LEMD3-203ENST00000541171 OSBPP22059 807 aa29.65■■■□□ 2.34
LEMD3-203ENST00000541171 HOXD10P28358 340 aa29.65■■■□□ 2.34
LEMD3-203ENST00000541171 CLUAP1Q96AJ1 413 aa29.65■■■□□ 2.34
LEMD3-203ENST00000541171 PARK7Q99497 189 aaKnown RBP29.65■■■□□ 2.34
LEMD3-203ENST00000541171 SRRDQ9UH36 339 aa29.65■■■□□ 2.34
LEMD3-203ENST00000541171 BCAR3O75815 825 aa29.64■■■□□ 2.34
LEMD3-203ENST00000541171 GNAI2P04899 355 aa29.64■■■□□ 2.34
LEMD3-203ENST00000541171 TRIM27P14373 513 aa29.64■■■□□ 2.34
LEMD3-203ENST00000541171 GADL1Q6ZQY3 521 aa29.64■■■□□ 2.34
LEMD3-203ENST00000541171 HMG20BQ9P0W2 317 aa29.64■■■□□ 2.34
LEMD3-203ENST00000541171 RFX7Q2KHR2 1363 aa29.64■■■□□ 2.33
LEMD3-203ENST00000541171 PI16Q6UXB8 463 aa29.63■■■□□ 2.33
LEMD3-203ENST00000541171 TBC1D9Q6ZT07 1266 aa29.63■■■□□ 2.33
LEMD3-203ENST00000541171 RAET1EQ8TD07 263 aa29.63■■■□□ 2.33
LEMD3-203ENST00000541171 GPR75-ASB3A0A0A6YYF3 556 aa29.62■■■□□ 2.33
LEMD3-203ENST00000541171 G3BP1Q13283 466 aaKnown RBP eCLIP29.62■■■□□ 2.336e-8■□□□□ 11.3
LEMD3-203ENST00000541171 ATF7IPQ6VMQ6 1270 aa29.62■■■□□ 2.33
LEMD3-203ENST00000541171 FASTKD5Q7L8L6 764 aaKnown RBP29.62■■■□□ 2.33
LEMD3-203ENST00000541171 AFG3L2Q9Y4W6 797 aa29.62■■■□□ 2.33
LEMD3-203ENST00000541171 DOCK2Q92608 1830 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 A0A0G2JLL6 359 aaPredicted RBP29.61■■■□□ 2.33
LEMD3-203ENST00000541171 MAP3K10Q02779 954 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 MTFR1Q15390 333 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 PRRT2Q7Z6L0 340 aaPredicted RBP29.61■■■□□ 2.33
LEMD3-203ENST00000541171 SPATA5Q8NB90 893 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 ZNF384Q8TF68 577 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 MYPNQ86TC9 1320 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 BRCA2P51587 3418 aa29.61■■■□□ 2.33
LEMD3-203ENST00000541171 PNMA6EA0A0J9YXQ4 647 aa29.6■■■□□ 2.33
LEMD3-203ENST00000541171 CTNND1O60716 968 aaKnown RBP29.6■■■□□ 2.33
LEMD3-203ENST00000541171 RHBDL3P58872 404 aa29.6■■■□□ 2.33
LEMD3-203ENST00000541171 CCDC84Q86UT8 332 aaPredicted RBP29.6■■■□□ 2.33
LEMD3-203ENST00000541171 RAI14Q9P0K7 980 aa29.6■■■□□ 2.33
LEMD3-203ENST00000541171 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.6■■■□□ 2.33
LEMD3-203ENST00000541171 TRIM75PA6NK02 468 aa29.59■■■□□ 2.33
LEMD3-203ENST00000541171 LDHCP07864 332 aa29.59■■■□□ 2.33
LEMD3-203ENST00000541171 BCRP11274 1271 aa29.59■■■□□ 2.33
LEMD3-203ENST00000541171 GRK4P32298 578 aa29.59■■■□□ 2.33
LEMD3-203ENST00000541171 GSTO1P78417 241 aa29.59■■■□□ 2.33
LEMD3-203ENST00000541171 HABP4Q5JVS0 413 aaKnown RBP29.59■■■□□ 2.33
LEMD3-203ENST00000541171 FAM196BA6NMK8 535 aa29.58■■■□□ 2.33
LEMD3-203ENST00000541171 FCGRTP55899 365 aa29.58■■■□□ 2.33
LEMD3-203ENST00000541171 NSUN4Q96CB9 384 aaKnown RBP29.58■■■□□ 2.33
LEMD3-203ENST00000541171 BIN2Q9UBW5 565 aaPredicted RBP29.58■■■□□ 2.33
LEMD3-203ENST00000541171 PRKCZQ05513 592 aa29.57■■■□□ 2.32
LEMD3-203ENST00000541171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.57■■■□□ 2.32
LEMD3-203ENST00000541171 ARID4AP29374 1257 aaPredicted RBP29.56■■■□□ 2.32
LEMD3-203ENST00000541171 MCAMP43121 646 aa29.55■■■□□ 2.32
LEMD3-203ENST00000541171 LRP2BPQ9P2M1 347 aa29.55■■■□□ 2.32
LEMD3-203ENST00000541171 GABRQQ9UN88 632 aa29.55■■■□□ 2.32
LEMD3-203ENST00000541171 TMEM57Q8N5G2 664 aa29.54■■■□□ 2.32
LEMD3-203ENST00000541171 TBC1D12O60347 775 aa29.53■■■□□ 2.32
LEMD3-203ENST00000541171 UQCRFS1P1P0C7P4 283 aa29.53■■■□□ 2.32
LEMD3-203ENST00000541171 SMCR8Q8TEV9 937 aaPredicted RBP29.53■■■□□ 2.32
LEMD3-203ENST00000541171 SNRKQ9NRH2 765 aa29.53■■■□□ 2.32
LEMD3-203ENST00000541171 NPM3O75607 178 aaKnown RBP29.52■■■□□ 2.32
LEMD3-203ENST00000541171 CCL5P13501 91 aa29.52■■■□□ 2.32
LEMD3-203ENST00000541171 ZKSCAN2Q63HK3 967 aa29.52■■■□□ 2.32
LEMD3-203ENST00000541171 TEX11Q8IYF3 940 aa29.52■■■□□ 2.32
LEMD3-203ENST00000541171 SHISA4Q96DD7 197 aa29.52■■■□□ 2.32
LEMD3-203ENST00000541171 OSBPL5Q9H0X9 879 aaPredicted RBP29.52■■■□□ 2.32
LEMD3-203ENST00000541171 SLC45A1Q9Y2W3 748 aa29.52■■■□□ 2.32
LEMD3-203ENST00000541171 DOCK1Q14185 1865 aa29.51■■■□□ 2.31
LEMD3-203ENST00000541171 MAP4K4O95819 1239 aaPredicted RBP29.51■■■□□ 2.31
LEMD3-203ENST00000541171 UBXN2AP68543 259 aa29.51■■■□□ 2.31
LEMD3-203ENST00000541171 OS9Q13438 667 aaPredicted RBP29.51■■■□□ 2.31
LEMD3-203ENST00000541171 RNF208Q9H0X6 261 aa29.51■■■□□ 2.31
LEMD3-203ENST00000541171 TTC39AQ5SRH9 613 aa29.5■■■□□ 2.31
LEMD3-203ENST00000541171 SH3RF3Q8TEJ3 882 aaPredicted RBP29.5■■■□□ 2.31
LEMD3-203ENST00000541171 NOL10Q9BSC4 688 aaKnown RBP29.5■■■□□ 2.31
LEMD3-203ENST00000541171 AGTPBP1Q9UPW5 1226 aa29.5■■■□□ 2.31
LEMD3-203ENST00000541171 SPP2Q13103 211 aa29.49■■■□□ 2.31
LEMD3-203ENST00000541171 TREML2Q5T2D2 321 aa29.49■■■□□ 2.31
LEMD3-203ENST00000541171 NKX2-3Q8TAU0 364 aa29.49■■■□□ 2.31
LEMD3-203ENST00000541171 TNPO2O14787 897 aaKnown RBP29.48■■■□□ 2.31
LEMD3-203ENST00000541171 FLT3LGP49771 235 aa29.48■■■□□ 2.31
LEMD3-203ENST00000541171 TNNI3KQ59H18 835 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms