RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CC2D2BQ6DHV5 1058 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 TGFBRAP1Q8WUH2 860 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 ADAMTSL1Q8N6G6 1762 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 BRD1O95696 1058 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 SCNN1DP51172 638 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 KIAA2012Q0VF49 1180 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 ZKSCAN3Q9BRR0 538 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 MCM9Q9NXL9 1143 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 TTF2Q9UNY4 1162 aaKnown RBP28.93■■■□□ 2.22
TTC3-225ENST00000540756 WDR19Q8NEZ3 1342 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 PRDM1O75626 825 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 USP5P45974 858 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 EVCP57679 992 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 IGDCC4Q8TDY8 1250 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 FAM163AQ96GL9 167 aaPredicted RBP28.92■■■□□ 2.22
TTC3-225ENST00000540756 DAGLAQ9Y4D2 1042 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 GAKO14976 1311 aa28.92■■■□□ 2.22
TTC3-225ENST00000540756 SH2B2O14492 632 aaPredicted RBP28.91■■■□□ 2.22
TTC3-225ENST00000540756 PPFIA3O75145 1194 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 SYT1P21579 422 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 SGIP1Q9BQI5 828 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 NOL10Q9BSC4 688 aaKnown RBP28.91■■■□□ 2.22
TTC3-225ENST00000540756 KRT23Q9C075 422 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 CNNM2Q9H8M5 875 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 ZNF646O15015 1829 aaPredicted RBP28.91■■■□□ 2.22
TTC3-225ENST00000540756 KLF18A0A0U1RQI7 1052 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 PPIP5K2O43314 1243 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 RHBDL3P58872 404 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 CCDC93Q567U6 631 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 MAPKAPK5Q8IW41 473 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 KLHL34Q8N239 644 aa28.91■■■□□ 2.22
TTC3-225ENST00000540756 ZNF274Q96GC6 653 aaPredicted RBP28.91■■■□□ 2.22
TTC3-225ENST00000540756 LAMB1P07942 1786 aa28.9■■■□□ 2.22
TTC3-225ENST00000540756 CTDNEP1O95476 244 aa28.9■■■□□ 2.22
TTC3-225ENST00000540756 ANGEL1Q9UNK9 670 aaKnown RBP28.9■■■□□ 2.22
TTC3-225ENST00000540756 TGFB2P61812 414 aa28.89■■■□□ 2.22
TTC3-225ENST00000540756 HPS5Q9UPZ3 1129 aa28.89■■■□□ 2.22
TTC3-225ENST00000540756 YDJCA8MPS7 323 aa28.89■■■□□ 2.21
TTC3-225ENST00000540756 DACT2Q5SW24 774 aa28.89■■■□□ 2.21
TTC3-225ENST00000540756 RNF41Q9H4P4 317 aaPredicted RBP28.89■■■□□ 2.21
TTC3-225ENST00000540756 LY9Q9HBG7 655 aa28.89■■■□□ 2.21
TTC3-225ENST00000540756 ZNF277Q9NRM2 450 aaPredicted RBP28.89■■■□□ 2.21
TTC3-225ENST00000540756 PIM2Q9P1W9 311 aa28.88■■■□□ 2.21
TTC3-225ENST00000540756 SAP30BPQ9UHR5 308 aaKnown RBP28.88■■■□□ 2.21
TTC3-225ENST00000540756 SUGT1Q9Y2Z0 365 aa28.88■■■□□ 2.21
TTC3-225ENST00000540756 BAG4O95429 457 aaKnown RBP28.87■■■□□ 2.21
TTC3-225ENST00000540756 TMEM67Q5HYA8 995 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 TEX11Q8IYF3 940 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 DDX11Q96FC9 970 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 ARPP21Q9UBL0 812 aaPredicted RBP28.87■■■□□ 2.21
TTC3-225ENST00000540756 NAV1Q8NEY1 1877 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 IFIT3O14879 490 aaKnown RBP28.87■■■□□ 2.21
TTC3-225ENST00000540756 STX6O43752 255 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 SBK1Q52WX2 424 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 STRIP1Q5VSL9 837 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 KIAA0825Q8IV33 1275 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 SLF2Q8IX21 1173 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 RTKN2Q8IZC4 609 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 SUPT20HQ8NEM7 779 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 COL4A5P29400 1685 aa28.87■■■□□ 2.21
TTC3-225ENST00000540756 GOLGA8BA8MQT2 603 aa28.86■■■□□ 2.21
TTC3-225ENST00000540756 RXRAP19793 462 aa28.86■■■□□ 2.21
TTC3-225ENST00000540756 TMEM87BQ96K49 555 aa28.86■■■□□ 2.21
TTC3-225ENST00000540756 PCDHAC2Q9Y5I4 1007 aa28.86■■■□□ 2.21
TTC3-225ENST00000540756 FGRP09769 529 aa28.86■■■□□ 2.21
TTC3-225ENST00000540756 PTGER2P43116 358 aa28.86■■■□□ 2.21
TTC3-225ENST00000540756 NSUN7Q8NE18 718 aaKnown RBP28.86■■■□□ 2.21
TTC3-225ENST00000540756 BRCA1P38398 1863 aaKnown RBP28.85■■■□□ 2.21
TTC3-225ENST00000540756 USP17L3A6NCW0 530 aa28.85■■■□□ 2.21
TTC3-225ENST00000540756 USP17L4A6NCW7 530 aa28.85■■■□□ 2.21
TTC3-225ENST00000540756 FOXD4L6Q3SYB3 417 aaPredicted RBP28.85■■■□□ 2.21
TTC3-225ENST00000540756 FOXD4L3Q6VB84 417 aaPredicted RBP28.85■■■□□ 2.21
TTC3-225ENST00000540756 CLEC17AQ6ZS10 378 aa28.85■■■□□ 2.21
TTC3-225ENST00000540756 USP17L1Q7RTZ2 530 aa28.85■■■□□ 2.21
TTC3-225ENST00000540756 DYNLL2Q96FJ2 89 aa28.85■■■□□ 2.21
TTC3-225ENST00000540756 GBP4Q96PP9 640 aa28.85■■■□□ 2.21
TTC3-225ENST00000540756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.85■■■□□ 2.215e-6■□□□□ 9.7
TTC3-225ENST00000540756 PLCD1P51178 756 aa28.84■■■□□ 2.21
TTC3-225ENST00000540756 C12orf60Q5U649 245 aa28.84■■■□□ 2.21
TTC3-225ENST00000540756 PSMD1Q99460 953 aa28.84■■■□□ 2.21
TTC3-225ENST00000540756 MYL10Q9BUA6 226 aa28.84■■■□□ 2.21
TTC3-225ENST00000540756 RANBP6O60518 1105 aaKnown RBP28.84■■■□□ 2.21
TTC3-225ENST00000540756 FLT1P17948 1338 aa28.83■■■□□ 2.21
TTC3-225ENST00000540756 WDR33Q9C0J8 1336 aaKnown RBP28.83■■■□□ 2.21
TTC3-225ENST00000540756 LARP1BQ659C4 914 aaKnown RBP28.83■■■□□ 2.21
TTC3-225ENST00000540756 SMARCC2Q8TAQ2 1214 aa28.83■■■□□ 2.21
TTC3-225ENST00000540756 ESR2Q92731 530 aa28.83■■■□□ 2.21
TTC3-225ENST00000540756 APOA5Q6Q788 366 aa28.82■■■□□ 2.2
TTC3-225ENST00000540756 MTMR6Q9Y217 621 aa28.82■■■□□ 2.2
TTC3-225ENST00000540756 PTPDC1A2A3K4 754 aa28.82■■■□□ 2.2
TTC3-225ENST00000540756 DALRD3Q5D0E6 543 aaKnown RBP28.82■■■□□ 2.2
TTC3-225ENST00000540756 NFXL1Q6ZNB6 911 aa28.82■■■□□ 2.2
TTC3-225ENST00000540756 CCDC144CPQ8IYA2 1237 aa28.82■■■□□ 2.2
TTC3-225ENST00000540756 ZSCAN22P10073 491 aaPredicted RBP28.81■■■□□ 2.2
TTC3-225ENST00000540756 PLCG2P16885 1265 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 FAM47AQ5JRC9 791 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 APOBEC3HQ6NTF7 200 aaKnown RBP28.81■■■□□ 2.2
TTC3-225ENST00000540756 SGMS1Q86VZ5 419 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 MYH1P12882 1939 aa28.81■■■□□ 2.2
TTC3-225ENST00000540756 FOCADQ5VW36 1801 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms