RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 PARK7Q99497 189 aaKnown RBP11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 PHAXQ9H814 394 aaKnown RBP11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 AOX1Q06278 1338 aa11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC1-202ENST00000540486 KLRK1P26718 216 aa11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 CDAN1Q8IWY9 1227 aa11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 WRNIP1Q96S55 665 aa11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 TDRD3Q9H7E2 651 aaKnown RBP11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 CWC25Q9NXE8 425 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 SERPINA10Q9UK55 444 aa11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 SYNGAP1Q96PV0 1343 aa11.24□□□□□ -0.61
TRAPPC1-202ENST00000540486 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 ALPK3Q96L96 1907 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 TCP10L2B9ZVM9 353 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 IL1R1P14778 569 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 KCNJ4P48050 445 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 CCDC30Q5VVM6 783 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 ZKSCAN4Q969J2 545 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 MYH16Q9H6N6 1097 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
TRAPPC1-202ENST00000540486 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 G2E3Q7L622 706 aa11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 DZIP1LQ8IYY4 767 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 MYD88Q99836 296 aa11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 GREM2Q9H772 168 aa11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 HMX1Q9NP08 348 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC1-202ENST00000540486 E9PSI1 815 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 PPP1R37O75864 691 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 FOSL2P15408 326 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 MOGSQ13724 837 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 ZNF804AQ7Z570 1209 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 MYLIPQ8WY64 445 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 COA7Q96BR5 231 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 MPHOSPH8Q99549 860 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
TRAPPC1-202ENST00000540486 CYP2C8P10632 490 aa11.2□□□□□ -0.62
TRAPPC1-202ENST00000540486 TTF2Q9UNY4 1162 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-202ENST00000540486 PFASO15067 1338 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 CXCL11O14625 94 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 HMGCRP04035 888 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 CHRNDQ07001 517 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 LHX8Q68G74 356 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 GPAT2Q6NUI2 795 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 FAM83AQ86UY5 434 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 METTL22Q9BUU2 404 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 C1QTNF1Q9BXJ1 281 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 ZNF341Q9BYN7 854 aa11.19□□□□□ -0.62
TRAPPC1-202ENST00000540486 COL6A1P12109 1028 aa11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 SMAD3P84022 425 aaKnown RBP11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 FKBP1CQ5VVH2 108 aa11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 FASTKD5Q7L8L6 764 aaKnown RBP11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 ATXN2LQ8WWM7 1075 aaKnown RBP11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
TRAPPC1-202ENST00000540486 PIEZO1Q92508 2521 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 PI4KAP2A4QPH2 592 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 ITGA6P23229 1130 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 CRKP46108 304 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 HDLBPQ00341 1268 aaKnown RBP11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 MFSD14BQ5SR56 506 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 PI4KAP1Q8N8J0 262 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 NCOR1O75376 2440 aa11.17□□□□□ -0.62
TRAPPC1-202ENST00000540486 DDX58O95786 925 aaKnown RBP11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 INPP5BP32019 993 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 FLIIQ13045 1269 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 LRRC26Q2I0M4 334 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 TMOD2Q9NZR1 351 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 ZNF112Q9UJU3 913 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 HCN4Q9Y3Q4 1203 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
TRAPPC1-202ENST00000540486 SNAP23O00161 211 aa11.15□□□□□ -0.62
TRAPPC1-202ENST00000540486 NOL9Q5SY16 702 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-202ENST00000540486 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
TRAPPC1-202ENST00000540486 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-202ENST00000540486 SMCR8Q8TEV9 937 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC1-202ENST00000540486 SNX27Q96L92 541 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms