RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TATDN2Q93075 761 aa10.85□□□□□ -0.67
CTNNA1-243ENST00000540387 TRIM37O94972 964 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 CLSTN1O94985 981 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 RDXP35241 583 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 USP5P45974 858 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 LARP1BQ659C4 914 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 INPP5BP32019 993 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 CCT5P48643 541 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 CCNHP51946 323 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 CRYMQ14894 314 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 PREPLQ4J6C6 727 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 WDR24Q96S15 920 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 C5P01031 1676 aa10.84□□□□□ -0.67
CTNNA1-243ENST00000540387 CPA1P15085 419 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 GRIK3Q13003 919 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 AFAP1L1Q8TED9 768 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ACBD3Q9H3P7 528 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ANKZF1Q9H8Y5 726 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ABCB6Q9NP58 842 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ODF2LQ9ULJ1 636 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 VWA3AA6NCI4 1184 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 EBAG9O00559 213 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 CHUKO15111 745 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 EPB41L2O43491 1005 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ADCY2Q08462 1091 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ST3GAL1Q11201 340 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 CASP8Q14790 479 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ZNF483Q8TF39 744 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ZSWIM4Q9H7M6 989 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 IFNKQ9P0W0 207 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 ZBTB1Q9Y2K1 713 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
CTNNA1-243ENST00000540387 RTN2O75298 545 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 ERLIN1O75477 346 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 GNG11P61952 73 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 AP1ARQ63HQ0 302 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 KSR2Q6VAB6 950 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 TTLL7Q6ZT98 887 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 PNKPQ96T60 521 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 RAB21Q9UL25 225 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 CAPN7Q9Y6W3 813 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 SALL3Q9BXA9 1300 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 ADCY9O60503 1353 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 RNF40O75150 1001 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 KCNB2Q92953 911 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 DHX58Q96C10 678 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 ANO10Q9NW15 660 aa10.82□□□□□ -0.68
CTNNA1-243ENST00000540387 MYO1FO00160 1098 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 DDX58O95786 925 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 CEP57L1Q8IYX8 460 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 OTUD6BQ8N6M0 293 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 UTP14AQ9BVJ6 771 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 CTAGE5O15320 804 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 CRKLP46109 303 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 CCT4P50991 539 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 RBM5P52756 815 aaKnown RBP eCLIP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 INTS5Q6P9B9 1019 aaKnown RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 IQCA1Q86XH1 822 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 NECAB1Q8N987 351 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 ZNF526Q8TF50 670 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 EME2A4GXA9 379 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 TMCO5BA8MYB1 307 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 ZSCAN12O43309 604 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 FNTAP49354 379 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 BEND3Q5T5X7 828 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 MSANTD4Q8NCY6 345 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 ZSCAN31Q96LW9 406 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 FAM210AQ96ND0 272 aa10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 SH2B1Q9NRF2 756 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-243ENST00000540387 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 WLSQ5T9L3 541 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 LINC00116Q8NCU8 138 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 FBXW7Q969H0 707 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 XAGE2Q96GT9 111 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 MEIS3Q99687 375 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 SH3GL3Q99963 347 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 CCNL1Q9UK58 526 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 LRRIQ3A6PVS8 624 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 SHOX2O60902 331 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 PRPF6O94906 941 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 HMGB1P09429 215 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 ME3Q16798 604 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 SRGAP1Q7Z6B7 1085 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms