RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
CCDC130-202ENST00000540216 CSADQ9Y600 493 aa16.27■□□□□ 0.2
CCDC130-202ENST00000540216 AK9Q5TCS8 1911 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 GOLIM4O00461 696 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 SREBF2Q12772 1141 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 PICALMQ13492 652 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-202ENST00000540216 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 TEX11Q8IYF3 940 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 LAMB1P07942 1786 aa16.26■□□□□ 0.19
CCDC130-202ENST00000540216 VGLL4Q14135 290 aa16.25■□□□□ 0.19
CCDC130-202ENST00000540216 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-202ENST00000540216 ZFPM1Q8IX07 1006 aa16.25■□□□□ 0.19
CCDC130-202ENST00000540216 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-202ENST00000540216 WRNIP1Q96S55 665 aa16.25■□□□□ 0.19
CCDC130-202ENST00000540216 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.193e-6■□□□□ 9.6
CCDC130-202ENST00000540216 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-202ENST00000540216 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-202ENST00000540216 SAGE1Q9NXZ1 904 aa16.25■□□□□ 0.19
CCDC130-202ENST00000540216 TTC41PQ6P2S7 1318 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
CCDC130-202ENST00000540216 PDE6AP16499 860 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 MIGA2Q7L4E1 593 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 PCNTO95613 3336 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 FOCADQ5VW36 1801 aa16.24■□□□□ 0.19
CCDC130-202ENST00000540216 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
CCDC130-202ENST00000540216 ERC2O15083 957 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 HSPA8P11142 646 aaKnown RBP16.23■□□□□ 0.19
CCDC130-202ENST00000540216 TM4SF4P48230 202 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 INHBEP58166 350 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 MAP3K10Q02779 954 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 SH3BP5LQ7L8J4 393 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
CCDC130-202ENST00000540216 ELP3Q9H9T3 547 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 PRDM10Q9NQV6 1147 aa16.23■□□□□ 0.19
CCDC130-202ENST00000540216 FLT1P17948 1338 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 SPDYE5A6NIY4 337 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 TBC1D12O60347 775 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 MKRN3Q13064 507 aaKnown RBP16.22■□□□□ 0.19
CCDC130-202ENST00000540216 ANKRD45Q5TZF3 282 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 MIGA1Q8NAN2 632 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 OPTNQ96CV9 577 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
CCDC130-202ENST00000540216 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 CDK5RAP2Q96SN8 1893 aa16.22■□□□□ 0.19
CCDC130-202ENST00000540216 ZNF532Q9HCE3 1301 aa16.21■□□□□ 0.19
CCDC130-202ENST00000540216 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
CCDC130-202ENST00000540216 MX1P20591 662 aa16.21■□□□□ 0.19
CCDC130-202ENST00000540216 DYNLL1P63167 89 aaKnown RBP16.21■□□□□ 0.19
CCDC130-202ENST00000540216 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
CCDC130-202ENST00000540216 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
CCDC130-202ENST00000540216 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.19
CCDC130-202ENST00000540216 RIOK1Q9BRS2 568 aaKnown RBP16.21■□□□□ 0.19
CCDC130-202ENST00000540216 RNF186Q9NXI6 227 aa16.21■□□□□ 0.19
CCDC130-202ENST00000540216 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
CCDC130-202ENST00000540216 MYH7P12883 1935 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 TCRBV5S4A2TA0A5A2 114 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
CCDC130-202ENST00000540216 ALDH1A1P00352 501 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 INPP5BP32019 993 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 ADD2P35612 726 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 GJA5P36382 358 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 LBX1P52954 281 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 UBE3CQ15386 1083 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 ZKSCAN4Q969J2 545 aaPredicted RBP16.2■□□□□ 0.18
CCDC130-202ENST00000540216 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
CCDC130-202ENST00000540216 PI4KBQ9UBF8 816 aa16.2■□□□□ 0.18
CCDC130-202ENST00000540216 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 PHF20L1A8MW92 1017 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 USP5P45974 858 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 GTF2A2P52657 109 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 PPATQ06203 517 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 PPIL2Q13356 520 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
CCDC130-202ENST00000540216 MAPKAPK5Q8IW41 473 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 KBTBD3Q8NAB2 608 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 OTUD5Q96G74 571 aa16.19■□□□□ 0.18
CCDC130-202ENST00000540216 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
CCDC130-202ENST00000540216 TESPA1A2RU30 521 aaPredicted RBP16.18■□□□□ 0.18
CCDC130-202ENST00000540216 CTNND1O60716 968 aaKnown RBP16.18■□□□□ 0.18
CCDC130-202ENST00000540216 TRPA1O75762 1119 aa16.18■□□□□ 0.18
CCDC130-202ENST00000540216 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
CCDC130-202ENST00000540216 TSHZ3Q63HK5 1081 aa16.18■□□□□ 0.18
CCDC130-202ENST00000540216 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
CCDC130-202ENST00000540216 SCYL3Q8IZE3 742 aa16.18■□□□□ 0.18
CCDC130-202ENST00000540216 PI4K2BQ8TCG2 481 aa16.18■□□□□ 0.18
CCDC130-202ENST00000540216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC130-202ENST00000540216 DOCK1Q14185 1865 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 ZFYP08048 801 aaPredicted RBP16.17■□□□□ 0.18
CCDC130-202ENST00000540216 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
CCDC130-202ENST00000540216 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
CCDC130-202ENST00000540216 FOXP4Q8IVH2 680 aaPredicted RBP16.17■□□□□ 0.18
CCDC130-202ENST00000540216 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms